Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSNK1A1P48729 AC009102.3-201ENST00000623118 1491 ntBASIC16.35■□□□□ 0.21
CSNK1A1P48729 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSNK1A1P48729 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CSNK1A1P48729 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
CSNK1A1P48729 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.35■□□□□ 0.21
CSNK1A1P48729 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSNK1A1P48729 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 MIR149-201ENST00000384879 89 ntBASIC16.34■□□□□ 0.21
CSNK1A1P48729 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 AC024243.1-201ENST00000609234 778 ntBASIC16.34■□□□□ 0.21
CSNK1A1P48729 AC141257.4-201ENST00000634557 245 ntBASIC16.34■□□□□ 0.21
CSNK1A1P48729 AC136944.6-201ENST00000634818 245 ntBASIC16.34■□□□□ 0.21
CSNK1A1P48729 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1A1P48729 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.34■□□□□ 0.21
CSNK1A1P48729 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1A1P48729 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.33■□□□□ 0.21
CSNK1A1P48729 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1A1P48729 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.33■□□□□ 0.21
CSNK1A1P48729 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1A1P48729 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1A1P48729 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1A1P48729 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.33■□□□□ 0.21
CSNK1A1P48729 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.33■□□□□ 0.21
CSNK1A1P48729 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1A1P48729 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CSNK1A1P48729 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC113347.1-201ENST00000413321 391 ntBASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC211429.1-201ENST00000415277 523 ntBASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 AL137013.1-201ENST00000432946 1228 ntBASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 MIR3180-4-201ENST00000582223 153 ntBASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC010240.3-201ENST00000607688 395 ntBASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC012306.2-201ENST00000609350 630 ntBASIC16.33■□□□□ 0.2
CSNK1A1P48729 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 AL162741.1-201ENST00000565563 1558 ntBASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1A1P48729 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1A1P48729 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1A1P48729 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1A1P48729 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms