Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A9P48067 AC112777.1-201ENST00000540175 1423 ntBASIC16.26■□□□□ 0.19
SLC6A9P48067 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A9P48067 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A9P48067 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A9P48067 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A9P48067 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.25■□□□□ 0.19
SLC6A9P48067 AL109659.2-201ENST00000606809 1674 ntBASIC16.25■□□□□ 0.19
SLC6A9P48067 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC6A9P48067 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC6A9P48067 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A9P48067 AC018470.1-201ENST00000624790 3129 ntBASIC16.25■□□□□ 0.19
SLC6A9P48067 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC6A9P48067 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SLC6A9P48067 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 AL355075.4-201ENST00000554988 638 ntBASIC16.25■□□□□ 0.19
SLC6A9P48067 AC008622.2-201ENST00000617006 1229 ntBASIC16.25■□□□□ 0.19
SLC6A9P48067 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.25■□□□□ 0.19
SLC6A9P48067 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A9P48067 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A9P48067 AC135050.7-201ENST00000624508 2218 ntBASIC16.25■□□□□ 0.19
SLC6A9P48067 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC6A9P48067 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A9P48067 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC6A9P48067 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC6A9P48067 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 TSPY15P-201ENST00000457163 923 ntBASIC16.24■□□□□ 0.19
SLC6A9P48067 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC6A9P48067 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC6A9P48067 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A9P48067 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 GPAT2P1-201ENST00000444924 1672 ntBASIC16.24■□□□□ 0.19
SLC6A9P48067 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC6A9P48067 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC6A9P48067 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SLC6A9P48067 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 PCDHB18P-201ENST00000524813 2368 ntBASIC16.23■□□□□ 0.19
SLC6A9P48067 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC6A9P48067 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 KRT8P45-201ENST00000414328 1447 ntBASIC16.23■□□□□ 0.19
SLC6A9P48067 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC6A9P48067 AL023284.2-201ENST00000405850 579 ntBASIC16.23■□□□□ 0.19
SLC6A9P48067 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC6A9P48067 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms