Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SSR1P43307 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSR1P43307 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.53■□□□□ 0.72
SSR1P43307 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.53■□□□□ 0.72
SSR1P43307 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.53■□□□□ 0.72
SSR1P43307 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.53■□□□□ 0.72
SSR1P43307 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.53■□□□□ 0.72
SSR1P43307 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.53■□□□□ 0.72
SSR1P43307 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 AC096733.2-201ENST00000609937 1394 ntBASIC19.53■□□□□ 0.72
SSR1P43307 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.53■□□□□ 0.72
SSR1P43307 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SSR1P43307 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SSR1P43307 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSR1P43307 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.53■□□□□ 0.72
SSR1P43307 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSR1P43307 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR1P43307 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SSR1P43307 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SSR1P43307 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.52■□□□□ 0.72
SSR1P43307 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.52■□□□□ 0.72
SSR1P43307 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR1P43307 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.52■□□□□ 0.72
SSR1P43307 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR1P43307 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.52■□□□□ 0.72
SSR1P43307 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.52■□□□□ 0.72
SSR1P43307 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR1P43307 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 AP003071.4-201ENST00000562276 1284 ntBASIC19.52■□□□□ 0.72
SSR1P43307 TMEM191A-211ENST00000637163 1067 ntBASIC19.52■□□□□ 0.72
SSR1P43307 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.52■□□□□ 0.72
SSR1P43307 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SSR1P43307 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR1P43307 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR1P43307 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.52■□□□□ 0.72
SSR1P43307 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
SSR1P43307 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSR1P43307 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSR1P43307 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSR1P43307 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.52■□□□□ 0.71
SSR1P43307 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSR1P43307 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSR1P43307 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSR1P43307 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SSR1P43307 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SSR1P43307 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.51■□□□□ 0.71
SSR1P43307 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.51■□□□□ 0.71
SSR1P43307 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SSR1P43307 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SSR1P43307 MIR718-201ENST00000390190 70 ntBASIC19.51■□□□□ 0.71
SSR1P43307 MCCD1P1-208ENST00000445732 328 ntBASIC19.51■□□□□ 0.71
SSR1P43307 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.51■□□□□ 0.71
SSR1P43307 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.51■□□□□ 0.71
SSR1P43307 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
SSR1P43307 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.51■□□□□ 0.71
SSR1P43307 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SSR1P43307 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.51■□□□□ 0.71
SSR1P43307 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms