Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNA3P32297 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 BCL2-203ENST00000589955 5011 ntBASIC19.36■□□□□ 0.69
CHRNA3P32297 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA3P32297 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 INGX-201ENST00000359239 846 ntBASIC19.36■□□□□ 0.69
CHRNA3P32297 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 SLC25A1P2-201ENST00000430693 912 ntBASIC19.36■□□□□ 0.69
CHRNA3P32297 SLC25A6P5-201ENST00000435663 894 ntBASIC19.36■□□□□ 0.69
CHRNA3P32297 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.36■□□□□ 0.69
CHRNA3P32297 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA3P32297 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.36■□□□□ 0.69
CHRNA3P32297 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.36■□□□□ 0.69
CHRNA3P32297 AC116562.4-202ENST00000641738 218 ntBASIC19.36■□□□□ 0.69
CHRNA3P32297 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CHRNA3P32297 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHRNA3P32297 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHRNA3P32297 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.35■□□□□ 0.69
CHRNA3P32297 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA3P32297 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHRNA3P32297 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHRNA3P32297 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA3P32297 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA3P32297 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA3P32297 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CHRNA3P32297 TMPOP1-202ENST00000424642 1267 ntBASIC19.35■□□□□ 0.69
CHRNA3P32297 AL137013.1-201ENST00000432946 1228 ntBASIC19.35■□□□□ 0.69
CHRNA3P32297 CCR12P-201ENST00000446203 998 ntBASIC19.35■□□□□ 0.69
CHRNA3P32297 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHRNA3P32297 RN7SL850P-201ENST00000579959 291 ntBASIC19.35■□□□□ 0.69
CHRNA3P32297 AC092865.7-201ENST00000641832 219 ntBASIC19.35■□□□□ 0.69
CHRNA3P32297 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA3P32297 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA3P32297 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA3P32297 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA3P32297 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.35■□□□□ 0.69
CHRNA3P32297 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA3P32297 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHRNA3P32297 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHRNA3P32297 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHRNA3P32297 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.34■□□□□ 0.69
CHRNA3P32297 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA3P32297 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA3P32297 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 TERF1P1-201ENST00000311003 1181 ntBASIC19.34■□□□□ 0.69
CHRNA3P32297 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA3P32297 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
CHRNA3P32297 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.34■□□□□ 0.69
CHRNA3P32297 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA3P32297 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CHRNA3P32297 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.33■□□□□ 0.69
CHRNA3P32297 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.33■□□□□ 0.69
CHRNA3P32297 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.33■□□□□ 0.69
CHRNA3P32297 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.33■□□□□ 0.69
CHRNA3P32297 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.33■□□□□ 0.69
CHRNA3P32297 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 GNAS-203ENST00000306120 1878 ntBASIC19.33■□□□□ 0.69
CHRNA3P32297 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.33■□□□□ 0.69
CHRNA3P32297 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CHRNA3P32297 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA3P32297 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA3P32297 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA3P32297 MIR1224-201ENST00000408193 85 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms