Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC6A4P31645 KRT18P56-201ENST00000507275 550 ntBASIC18.8■□□□□ 0.6
SLC6A4P31645 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC6A4P31645 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC6A4P31645 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLC6A4P31645 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A4P31645 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC6A4P31645 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC6A4P31645 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A4P31645 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC6A4P31645 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A4P31645 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC6A4P31645 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC6A4P31645 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC6A4P31645 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SLC6A4P31645 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC6A4P31645 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC6A4P31645 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SLC6A4P31645 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
SLC6A4P31645 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A4P31645 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A4P31645 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SLC6A4P31645 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.78■□□□□ 0.6
SLC6A4P31645 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC6A4P31645 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A4P31645 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 RNF165-205ENST00000588679 2904 ntBASIC18.78■□□□□ 0.6
SLC6A4P31645 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC6A4P31645 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A4P31645 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC6A4P31645 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A4P31645 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC6A4P31645 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SLC6A4P31645 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A4P31645 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC6A4P31645 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC6A4P31645 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A4P31645 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A4P31645 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A4P31645 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A4P31645 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A4P31645 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A4P31645 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC6A4P31645 AL138781.2-201ENST00000617896 1843 ntBASIC18.77■□□□□ 0.6
SLC6A4P31645 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A4P31645 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A4P31645 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SLC6A4P31645 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A4P31645 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A4P31645 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A4P31645 AC113404.2-201ENST00000507884 177 ntBASIC18.77■□□□□ 0.6
SLC6A4P31645 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC6A4P31645 TPSP2-201ENST00000561760 610 ntBASIC18.77■□□□□ 0.6
SLC6A4P31645 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.77■□□□□ 0.6
SLC6A4P31645 AC092329.2-201ENST00000598402 547 ntBASIC18.77■□□□□ 0.6
SLC6A4P31645 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SLC6A4P31645 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC6A4P31645 ESPNP-201ENST00000270691 2015 ntBASIC18.77■□□□□ 0.6
SLC6A4P31645 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A4P31645 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A4P31645 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A4P31645 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.77■□□□□ 0.59
SLC6A4P31645 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC6A4P31645 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC6A4P31645 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SLC6A4P31645 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A4P31645 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 KRT18P1-202ENST00000452408 1331 ntBASIC18.76■□□□□ 0.59
SLC6A4P31645 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms