Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PTPN6P29350 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTPN6P29350 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTPN6P29350 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PTPN6P29350 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PTPN6P29350 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN6P29350 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 C2orf69P3-201ENST00000565542 1120 ntBASIC17.42■□□□□ 0.38
PTPN6P29350 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.42■□□□□ 0.38
PTPN6P29350 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN6P29350 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN6P29350 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PTPN6P29350 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 AL096828.2-201ENST00000567259 1965 ntBASIC17.42■□□□□ 0.38
PTPN6P29350 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN6P29350 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN6P29350 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN6P29350 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTPN6P29350 FLJ13224-201ENST00000313737 1514 ntBASIC17.42■□□□□ 0.38
PTPN6P29350 GNAS-203ENST00000306120 1878 ntBASIC17.41■□□□□ 0.38
PTPN6P29350 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPN6P29350 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTPN6P29350 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN6P29350 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN6P29350 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN6P29350 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN6P29350 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.41■□□□□ 0.38
PTPN6P29350 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 AC145285.6-201ENST00000604632 637 ntBASIC17.41■□□□□ 0.38
PTPN6P29350 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN6P29350 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN6P29350 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN6P29350 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTPN6P29350 LINC01568-207ENST00000641790 1380 ntBASIC17.4■□□□□ 0.38
PTPN6P29350 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTPN6P29350 PHGDH-209ENST00000641074 1780 ntBASIC17.4■□□□□ 0.38
PTPN6P29350 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN6P29350 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PTPN6P29350 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTPN6P29350 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PTPN6P29350 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN6P29350 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
PTPN6P29350 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN6P29350 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN6P29350 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PTPN6P29350 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN6P29350 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN6P29350 MCCD1P1-208ENST00000445732 328 ntBASIC17.4■□□□□ 0.38
PTPN6P29350 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PTPN6P29350 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN6P29350 AC020916.1-201ENST00000587762 1774 ntBASIC17.4■□□□□ 0.38
PTPN6P29350 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PTPN6P29350 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms