Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
ABCD3P28288 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.89■□□□□ 0.29
ABCD3P28288 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ABCD3P28288 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 ARMC10P1-201ENST00000313754 855 ntBASIC16.89■□□□□ 0.29
ABCD3P28288 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.89■□□□□ 0.29
ABCD3P28288 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.89■□□□□ 0.29
ABCD3P28288 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.89■□□□□ 0.29
ABCD3P28288 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.89■□□□□ 0.29
ABCD3P28288 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ABCD3P28288 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.89■□□□□ 0.29
ABCD3P28288 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.89■□□□□ 0.29
ABCD3P28288 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.89■□□□□ 0.29
ABCD3P28288 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.89■□□□□ 0.29
ABCD3P28288 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.89■□□□□ 0.29
ABCD3P28288 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
ABCD3P28288 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.89■□□□□ 0.29
ABCD3P28288 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ABCD3P28288 AC090164.3-201ENST00000610780 2143 ntBASIC16.88■□□□□ 0.29
ABCD3P28288 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ABCD3P28288 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.88■□□□□ 0.29
ABCD3P28288 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 SPDYE13P-201ENST00000445314 798 ntBASIC16.88■□□□□ 0.29
ABCD3P28288 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.88■□□□□ 0.29
ABCD3P28288 VENTXP5-201ENST00000523979 775 ntBASIC16.88■□□□□ 0.29
ABCD3P28288 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.88■□□□□ 0.29
ABCD3P28288 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.88■□□□□ 0.29
ABCD3P28288 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 AL121956.5-201ENST00000625261 221 ntBASIC16.88■□□□□ 0.29
ABCD3P28288 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ABCD3P28288 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.88■□□□□ 0.29
ABCD3P28288 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.88■□□□□ 0.29
ABCD3P28288 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ABCD3P28288 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ABCD3P28288 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.87■□□□□ 0.29
ABCD3P28288 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.87■□□□□ 0.29
ABCD3P28288 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.87■□□□□ 0.29
ABCD3P28288 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ABCD3P28288 GMCL1P1-201ENST00000463439 1581 ntBASIC16.87■□□□□ 0.29
ABCD3P28288 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.87■□□□□ 0.29
ABCD3P28288 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.87■□□□□ 0.29
ABCD3P28288 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 AC009113.1-201ENST00000570267 2443 ntBASIC16.87■□□□□ 0.29
ABCD3P28288 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ABCD3P28288 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ABCD3P28288 AL024508.2-201ENST00000607749 1894 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms