Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
COL8A2P25067 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.49■□□□□ 0.07
COL8A2P25067 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.49■□□□□ 0.07
COL8A2P25067 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.49■□□□□ 0.07
COL8A2P25067 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.49■□□□□ 0.07
COL8A2P25067 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 AC024563.2-201ENST00000603282 481 ntBASIC15.49■□□□□ 0.07
COL8A2P25067 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 Z83836.1-201ENST00000624605 1642 ntBASIC15.49■□□□□ 0.07
COL8A2P25067 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
COL8A2P25067 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.49■□□□□ 0.07
COL8A2P25067 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.49■□□□□ 0.07
COL8A2P25067 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
COL8A2P25067 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.49■□□□□ 0.07
COL8A2P25067 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL8A2P25067 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.48■□□□□ 0.07
COL8A2P25067 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
COL8A2P25067 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
COL8A2P25067 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.48■□□□□ 0.07
COL8A2P25067 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 AC026471.1-201ENST00000564629 3026 ntBASIC15.48■□□□□ 0.07
COL8A2P25067 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.48■□□□□ 0.07
COL8A2P25067 AP002383.4-201ENST00000442518 975 ntBASIC15.48■□□□□ 0.07
COL8A2P25067 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.48■□□□□ 0.07
COL8A2P25067 MIR3180-1-201ENST00000580374 94 ntBASIC15.48■□□□□ 0.07
COL8A2P25067 MIR3180-3-201ENST00000584616 94 ntBASIC15.48■□□□□ 0.07
COL8A2P25067 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.48■□□□□ 0.07
COL8A2P25067 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
COL8A2P25067 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.48■□□□□ 0.07
COL8A2P25067 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.48■□□□□ 0.07
COL8A2P25067 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
COL8A2P25067 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.48■□□□□ 0.07
COL8A2P25067 AL499627.1-201ENST00000569373 2188 ntBASIC15.48■□□□□ 0.07
COL8A2P25067 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
COL8A2P25067 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.47■□□□□ 0.07
COL8A2P25067 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 CHCHD2P8-201ENST00000429873 447 ntBASIC15.47■□□□□ 0.07
COL8A2P25067 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.47■□□□□ 0.07
COL8A2P25067 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 KRT126P-201ENST00000549467 1181 ntBASIC15.47■□□□□ 0.07
COL8A2P25067 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.47■□□□□ 0.07
COL8A2P25067 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.47■□□□□ 0.07
COL8A2P25067 AP002414.4-201ENST00000589764 1148 ntBASIC15.47■□□□□ 0.07
COL8A2P25067 CLEC4GP1-201ENST00000596555 870 ntBASIC15.47■□□□□ 0.07
COL8A2P25067 AC104581.1-202ENST00000635932 2618 ntBASIC15.47■□□□□ 0.07
COL8A2P25067 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
COL8A2P25067 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
COL8A2P25067 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL8A2P25067 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.47■□□□□ 0.07
COL8A2P25067 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.47■□□□□ 0.07
COL8A2P25067 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL8A2P25067 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.46■□□□□ 0.07
COL8A2P25067 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.46■□□□□ 0.07
COL8A2P25067 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms