Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
GCFC2P16383 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.72■□□□□ 0.91
GCFC2P16383 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 LINC01126-201ENST00000623515 1646 ntBASIC20.72■□□□□ 0.91
GCFC2P16383 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.72■□□□□ 0.91
GCFC2P16383 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 SPDYE13P-201ENST00000445314 798 ntBASIC20.72■□□□□ 0.91
GCFC2P16383 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.72■□□□□ 0.91
GCFC2P16383 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.72■□□□□ 0.91
GCFC2P16383 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.72■□□□□ 0.91
GCFC2P16383 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.72■□□□□ 0.91
GCFC2P16383 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.72■□□□□ 0.91
GCFC2P16383 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.72■□□□□ 0.91
GCFC2P16383 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.72■□□□□ 0.91
GCFC2P16383 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.72■□□□□ 0.91
GCFC2P16383 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
GCFC2P16383 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
GCFC2P16383 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
GCFC2P16383 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
GCFC2P16383 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.71■□□□□ 0.91
GCFC2P16383 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.71■□□□□ 0.91
GCFC2P16383 AC113404.2-201ENST00000507884 177 ntBASIC20.71■□□□□ 0.91
GCFC2P16383 KRT18P35-201ENST00000510488 1269 ntBASIC20.71■□□□□ 0.91
GCFC2P16383 VENTXP5-201ENST00000523979 775 ntBASIC20.71■□□□□ 0.91
GCFC2P16383 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.71■□□□□ 0.91
GCFC2P16383 AL136038.3-201ENST00000561909 1096 ntBASIC20.71■□□□□ 0.91
GCFC2P16383 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.71■□□□□ 0.91
GCFC2P16383 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.71■□□□□ 0.91
GCFC2P16383 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.71■□□□□ 0.91
GCFC2P16383 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.71■□□□□ 0.91
GCFC2P16383 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.71■□□□□ 0.91
GCFC2P16383 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.71■□□□□ 0.91
GCFC2P16383 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GCFC2P16383 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
GCFC2P16383 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
GCFC2P16383 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GCFC2P16383 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.7■□□□□ 0.91
GCFC2P16383 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.7■□□□□ 0.9
GCFC2P16383 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 KRT18P48-201ENST00000434763 852 ntBASIC20.7■□□□□ 0.9
GCFC2P16383 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.7■□□□□ 0.9
GCFC2P16383 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.7■□□□□ 0.9
GCFC2P16383 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.7■□□□□ 0.9
GCFC2P16383 AC087388.1-201ENST00000571370 1112 ntBASIC20.7■□□□□ 0.9
GCFC2P16383 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.7■□□□□ 0.9
GCFC2P16383 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
GCFC2P16383 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
GCFC2P16383 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
GCFC2P16383 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GCFC2P16383 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.7■□□□□ 0.9
GCFC2P16383 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
GCFC2P16383 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
GCFC2P16383 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GCFC2P16383 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.69■□□□□ 0.9
GCFC2P16383 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GCFC2P16383 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.69■□□□□ 0.9
GCFC2P16383 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GCFC2P16383 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GCFC2P16383 AC104581.1-202ENST00000635932 2618 ntBASIC20.69■□□□□ 0.9
GCFC2P16383 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GCFC2P16383 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.69■□□□□ 0.9
GCFC2P16383 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.69■□□□□ 0.9
GCFC2P16383 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.69■□□□□ 0.9
GCFC2P16383 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.69■□□□□ 0.9
GCFC2P16383 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.69■□□□□ 0.9
GCFC2P16383 AL445228.2-201ENST00000605589 952 ntBASIC20.69■□□□□ 0.9
GCFC2P16383 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
GCFC2P16383 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GCFC2P16383 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GCFC2P16383 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GCFC2P16383 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GCFC2P16383 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms