Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.37■□□□□ 0.37
NCK1P16333 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NCK1P16333 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.37■□□□□ 0.37
NCK1P16333 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.37■□□□□ 0.37
NCK1P16333 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
NCK1P16333 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NCK1P16333 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.36■□□□□ 0.37
NCK1P16333 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NCK1P16333 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NCK1P16333 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NCK1P16333 AC008403.3-201ENST00000598924 454 ntBASIC17.36■□□□□ 0.37
NCK1P16333 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
NCK1P16333 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.36■□□□□ 0.37
NCK1P16333 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
NCK1P16333 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.36■□□□□ 0.37
NCK1P16333 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
NCK1P16333 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.36■□□□□ 0.37
NCK1P16333 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.36■□□□□ 0.37
NCK1P16333 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NCK1P16333 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCK1P16333 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.35■□□□□ 0.37
NCK1P16333 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.35■□□□□ 0.37
NCK1P16333 AC069152.1-201ENST00000438030 544 ntBASIC17.35■□□□□ 0.37
NCK1P16333 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.35■□□□□ 0.37
NCK1P16333 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.35■□□□□ 0.37
NCK1P16333 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.35■□□□□ 0.37
NCK1P16333 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NCK1P16333 MTDHP1-201ENST00000605323 784 ntBASIC17.35■□□□□ 0.37
NCK1P16333 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.35■□□□□ 0.37
NCK1P16333 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.35■□□□□ 0.37
NCK1P16333 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.35■□□□□ 0.37
NCK1P16333 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.35■□□□□ 0.37
NCK1P16333 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NCK1P16333 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.35■□□□□ 0.37
NCK1P16333 AC141586.5-201ENST00000624546 2050 ntBASIC17.35■□□□□ 0.37
NCK1P16333 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NCK1P16333 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NCK1P16333 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.34■□□□□ 0.37
NCK1P16333 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NCK1P16333 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.34■□□□□ 0.37
NCK1P16333 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.34■□□□□ 0.37
NCK1P16333 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 AC091390.4-202ENST00000476426 537 ntBASIC17.34■□□□□ 0.37
NCK1P16333 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 UNC93B5-201ENST00000530315 699 ntBASIC17.34■□□□□ 0.37
NCK1P16333 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.34■□□□□ 0.37
NCK1P16333 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NCK1P16333 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms