Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TCF4P15884 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.14■□□□□ 0.66
TCF4P15884 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.14■□□□□ 0.66
TCF4P15884 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TCF4P15884 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TCF4P15884 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TCF4P15884 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TCF4P15884 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TCF4P15884 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TCF4P15884 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.14■□□□□ 0.65
TCF4P15884 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TCF4P15884 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCF4P15884 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.13■□□□□ 0.65
TCF4P15884 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.13■□□□□ 0.65
TCF4P15884 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
TCF4P15884 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TCF4P15884 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TCF4P15884 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.13■□□□□ 0.65
TCF4P15884 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.13■□□□□ 0.65
TCF4P15884 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TCF4P15884 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 HMGA1P5-201ENST00000412453 271 ntBASIC19.13■□□□□ 0.65
TCF4P15884 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.13■□□□□ 0.65
TCF4P15884 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.13■□□□□ 0.65
TCF4P15884 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.13■□□□□ 0.65
TCF4P15884 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.13■□□□□ 0.65
TCF4P15884 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.13■□□□□ 0.65
TCF4P15884 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 AC010240.3-201ENST00000607688 395 ntBASIC19.13■□□□□ 0.65
TCF4P15884 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.13■□□□□ 0.65
TCF4P15884 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.13■□□□□ 0.65
TCF4P15884 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TCF4P15884 AL024508.2-201ENST00000607749 1894 ntBASIC19.13■□□□□ 0.65
TCF4P15884 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCF4P15884 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.13■□□□□ 0.65
TCF4P15884 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.12■□□□□ 0.65
TCF4P15884 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.12■□□□□ 0.65
TCF4P15884 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TCF4P15884 AC138028.4-201ENST00000564984 1845 ntBASIC19.12■□□□□ 0.65
TCF4P15884 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.12■□□□□ 0.65
TCF4P15884 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TCF4P15884 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.12■□□□□ 0.65
TCF4P15884 AC145285.6-201ENST00000604632 637 ntBASIC19.12■□□□□ 0.65
TCF4P15884 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
TCF4P15884 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.12■□□□□ 0.65
TCF4P15884 AP000997.3-201ENST00000623333 2250 ntBASIC19.12■□□□□ 0.65
TCF4P15884 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.12■□□□□ 0.65
TCF4P15884 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCF4P15884 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TCF4P15884 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.11■□□□□ 0.65
TCF4P15884 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TCF4P15884 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
TCF4P15884 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TCF4P15884 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.11■□□□□ 0.65
TCF4P15884 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.11■□□□□ 0.65
TCF4P15884 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.11■□□□□ 0.65
TCF4P15884 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.11■□□□□ 0.65
TCF4P15884 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.11■□□□□ 0.65
TCF4P15884 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCF4P15884 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.11■□□□□ 0.65
TCF4P15884 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms