Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRP12270 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 ATP5G2P4-201ENST00000442175 420 ntBASIC17.16■□□□□ 0.34
TPRP12270 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRP12270 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.16■□□□□ 0.34
TPRP12270 AC136632.2-201ENST00000512891 861 ntBASIC17.16■□□□□ 0.34
TPRP12270 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRP12270 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.16■□□□□ 0.34
TPRP12270 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.16■□□□□ 0.34
TPRP12270 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
TPRP12270 AC008761.3-201ENST00000624803 892 ntBASIC17.16■□□□□ 0.34
TPRP12270 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPRP12270 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TPRP12270 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TPRP12270 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.15■□□□□ 0.34
TPRP12270 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TPRP12270 AC112777.1-201ENST00000540175 1423 ntBASIC17.15■□□□□ 0.34
TPRP12270 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.15■□□□□ 0.34
TPRP12270 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 NME2P1-201ENST00000426182 414 ntBASIC17.15■□□□□ 0.34
TPRP12270 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.15■□□□□ 0.34
TPRP12270 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRP12270 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRP12270 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
TPRP12270 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRP12270 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.15■□□□□ 0.34
TPRP12270 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.15■□□□□ 0.34
TPRP12270 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.15■□□□□ 0.34
TPRP12270 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.15■□□□□ 0.34
TPRP12270 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.15■□□□□ 0.34
TPRP12270 GPR89P-201ENST00000407924 1495 ntBASIC17.15■□□□□ 0.34
TPRP12270 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.15■□□□□ 0.34
TPRP12270 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPRP12270 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.14■□□□□ 0.34
TPRP12270 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TPRP12270 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRP12270 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TPRP12270 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRP12270 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPRP12270 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TPRP12270 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TPRP12270 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TPRP12270 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.14■□□□□ 0.33
TPRP12270 AC104390.1-201ENST00000555663 520 ntBASIC17.14■□□□□ 0.33
TPRP12270 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.14■□□□□ 0.33
TPRP12270 AC093520.2-201ENST00000561830 333 ntBASIC17.14■□□□□ 0.33
TPRP12270 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.14■□□□□ 0.33
TPRP12270 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TPRP12270 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.14■□□□□ 0.33
TPRP12270 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.14■□□□□ 0.33
TPRP12270 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.14■□□□□ 0.33
TPRP12270 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.14■□□□□ 0.33
TPRP12270 AC012676.1-201ENST00000574705 1949 ntBASIC17.14■□□□□ 0.33
TPRP12270 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TPRP12270 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.14■□□□□ 0.33
TPRP12270 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TPRP12270 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.14■□□□□ 0.33
TPRP12270 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
TPRP12270 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.14■□□□□ 0.33
TPRP12270 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.14■□□□□ 0.33
TPRP12270 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.14■□□□□ 0.33
TPRP12270 AC004835.2-201ENST00000603762 682 ntBASIC17.14■□□□□ 0.33
TPRP12270 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TPRP12270 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TPRP12270 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.13■□□□□ 0.33
TPRP12270 FAM86GP-201ENST00000448322 971 ntBASIC17.13■□□□□ 0.33
TPRP12270 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.13■□□□□ 0.33
TPRP12270 MTDHP4-201ENST00000600287 670 ntBASIC17.13■□□□□ 0.33
TPRP12270 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.13■□□□□ 0.33
TPRP12270 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TPRP12270 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPRP12270 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms