Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.53■■□□□ 1.04
TOP1P11387 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.53■■□□□ 1.04
TOP1P11387 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 MIR149-201ENST00000384879 89 ntBASIC21.53■■□□□ 1.04
TOP1P11387 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TOP1P11387 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.53■■□□□ 1.04
TOP1P11387 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.53■■□□□ 1.04
TOP1P11387 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.53■■□□□ 1.04
TOP1P11387 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.53■■□□□ 1.04
TOP1P11387 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TOP1P11387 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
TOP1P11387 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.53■■□□□ 1.04
TOP1P11387 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.53■■□□□ 1.04
TOP1P11387 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TOP1P11387 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.53■■□□□ 1.04
TOP1P11387 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TOP1P11387 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TOP1P11387 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TOP1P11387 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TOP1P11387 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TOP1P11387 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TOP1P11387 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.52■■□□□ 1.04
TOP1P11387 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.52■■□□□ 1.04
TOP1P11387 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.52■■□□□ 1.04
TOP1P11387 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.52■■□□□ 1.04
TOP1P11387 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.52■■□□□ 1.04
TOP1P11387 AC011498.5-201ENST00000592027 486 ntBASIC21.52■■□□□ 1.04
TOP1P11387 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
TOP1P11387 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TOP1P11387 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.52■■□□□ 1.04
TOP1P11387 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.52■■□□□ 1.04
TOP1P11387 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.52■■□□□ 1.04
TOP1P11387 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.51■■□□□ 1.03
TOP1P11387 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 CROCCP3-202ENST00000420820 1947 ntBASIC21.51■■□□□ 1.03
TOP1P11387 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TOP1P11387 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.51■■□□□ 1.03
TOP1P11387 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.51■■□□□ 1.03
TOP1P11387 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.51■■□□□ 1.03
TOP1P11387 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.51■■□□□ 1.03
TOP1P11387 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.51■■□□□ 1.03
TOP1P11387 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.51■■□□□ 1.03
TOP1P11387 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.51■■□□□ 1.03
TOP1P11387 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.51■■□□□ 1.03
TOP1P11387 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.51■■□□□ 1.03
TOP1P11387 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
TOP1P11387 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 AC009102.3-201ENST00000623118 1491 ntBASIC21.51■■□□□ 1.03
TOP1P11387 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TOP1P11387 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TOP1P11387 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TOP1P11387 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.5■■□□□ 1.03
TOP1P11387 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TOP1P11387 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TOP1P11387 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TOP1P11387 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TOP1P11387 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.5■■□□□ 1.03
TOP1P11387 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.5■■□□□ 1.03
TOP1P11387 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.5■■□□□ 1.03
TOP1P11387 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.5■■□□□ 1.03
TOP1P11387 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.5■■□□□ 1.03
TOP1P11387 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP1P11387 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP1P11387 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.5■■□□□ 1.03
TOP1P11387 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.5■■□□□ 1.03
TOP1P11387 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TOP1P11387 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TOP1P11387 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.49■■□□□ 1.03
TOP1P11387 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TOP1P11387 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms