Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 MIR1224-201ENST00000408193 85 ntBASIC21.29■■□□□ 1
CALM3P0DP25 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.29■■□□□ 1
CALM3P0DP25 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.29■■□□□ 1
CALM3P0DP25 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.29■■□□□ 1
CALM3P0DP25 AC010331.1-201ENST00000611423 582 ntBASIC21.29■■□□□ 1
CALM3P0DP25 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.29■■□□□ 1
CALM3P0DP25 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.29■■□□□ 1
CALM3P0DP25 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CALM3P0DP25 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.29■■□□□ 1
CALM3P0DP25 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CALM3P0DP25 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.29■■□□□ 1
CALM3P0DP25 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CALM3P0DP25 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.29■■□□□ 1
CALM3P0DP25 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CALM3P0DP25 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALM3P0DP25 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.28■■□□□ 1
CALM3P0DP25 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.28■■□□□ 1
CALM3P0DP25 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALM3P0DP25 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.28■■□□□ 1
CALM3P0DP25 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.28■■□□□ 1
CALM3P0DP25 KRT18P48-201ENST00000434763 852 ntBASIC21.28■■□□□ 1
CALM3P0DP25 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.28■■□□□ 1
CALM3P0DP25 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.28■■□□□ 1
CALM3P0DP25 AC113404.2-201ENST00000507884 177 ntBASIC21.28■■□□□ 1
CALM3P0DP25 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.28■■□□□ 1
CALM3P0DP25 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.28■■□□□ 1
CALM3P0DP25 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.28■■□□□ 1
CALM3P0DP25 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.28■■□□□ 1
CALM3P0DP25 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.28■■□□□ 1
CALM3P0DP25 AL121956.5-201ENST00000625261 221 ntBASIC21.28■■□□□ 1
CALM3P0DP25 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CALM3P0DP25 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CALM3P0DP25 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.28■■□□□ 1
CALM3P0DP25 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.28■■□□□ 1
CALM3P0DP25 AC093677.2-201ENST00000600169 1863 ntBASIC21.28■■□□□ 1
CALM3P0DP25 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALM3P0DP25 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CALM3P0DP25 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CALM3P0DP25 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.27■■□□□ 1
CALM3P0DP25 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.27■■□□□ 1
CALM3P0DP25 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.27■■□□□ 1
CALM3P0DP25 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.27■■□□□ 1
CALM3P0DP25 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.27■■□□□ 1
CALM3P0DP25 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.27■■□□□ 1
CALM3P0DP25 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.27■■□□□ 1
CALM3P0DP25 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CALM3P0DP25 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CALM3P0DP25 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.27■■□□□ 1
CALM3P0DP25 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.27■■□□□ 1
CALM3P0DP25 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.27■■□□□ 1
CALM3P0DP25 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CALM3P0DP25 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CALM3P0DP25 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CALM3P0DP25 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CALM3P0DP25 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CALM3P0DP25 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CALM3P0DP25 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CALM3P0DP25 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CALM3P0DP25 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CALM3P0DP25 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.26■□□□□ 0.99
CALM3P0DP25 SPDYE13P-201ENST00000445314 798 ntBASIC21.26■□□□□ 0.99
CALM3P0DP25 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.26■□□□□ 0.99
CALM3P0DP25 VENTXP5-201ENST00000523979 775 ntBASIC21.26■□□□□ 0.99
CALM3P0DP25 AL136038.3-201ENST00000561909 1096 ntBASIC21.26■□□□□ 0.99
CALM3P0DP25 AC087388.1-201ENST00000571370 1112 ntBASIC21.26■□□□□ 0.99
CALM3P0DP25 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
CALM3P0DP25 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.26■□□□□ 0.99
CALM3P0DP25 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CALM3P0DP25 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.25■□□□□ 0.99
CALM3P0DP25 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CALM3P0DP25 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms