Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 MIR564-202ENST00000385049 94 ntBASIC16.11■□□□□ 0.17
UBCP0CG48 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.11■□□□□ 0.17
UBCP0CG48 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 DGCR10-201ENST00000609839 495 ntBASIC16.11■□□□□ 0.17
UBCP0CG48 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 AC096733.2-201ENST00000609937 1394 ntBASIC16.11■□□□□ 0.17
UBCP0CG48 AC067852.2-201ENST00000590513 2313 ntBASIC16.11■□□□□ 0.17
UBCP0CG48 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 AL135905.2-201ENST00000584934 1404 ntBASIC16.11■□□□□ 0.17
UBCP0CG48 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBCP0CG48 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBCP0CG48 FLJ13224-201ENST00000313737 1514 ntBASIC16.1■□□□□ 0.17
UBCP0CG48 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBCP0CG48 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
UBCP0CG48 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.1■□□□□ 0.17
UBCP0CG48 AC034236.2-201ENST00000606662 1610 ntBASIC16.1■□□□□ 0.17
UBCP0CG48 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.1■□□□□ 0.17
UBCP0CG48 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBCP0CG48 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.1■□□□□ 0.17
UBCP0CG48 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBCP0CG48 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
UBCP0CG48 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBCP0CG48 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 REXO1L9P-201ENST00000604264 2108 ntBASIC16.1■□□□□ 0.17
UBCP0CG48 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBCP0CG48 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.1■□□□□ 0.17
UBCP0CG48 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBCP0CG48 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.1■□□□□ 0.17
UBCP0CG48 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 GMCL1P1-201ENST00000463439 1581 ntBASIC16.09■□□□□ 0.17
UBCP0CG48 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
UBCP0CG48 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 AL023284.2-201ENST00000405850 579 ntBASIC16.09■□□□□ 0.17
UBCP0CG48 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBCP0CG48 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.09■□□□□ 0.17
UBCP0CG48 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
UBCP0CG48 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.09■□□□□ 0.17
UBCP0CG48 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.09■□□□□ 0.17
UBCP0CG48 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.09■□□□□ 0.17
UBCP0CG48 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.09■□□□□ 0.17
UBCP0CG48 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
UBCP0CG48 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.09■□□□□ 0.17
UBCP0CG48 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBCP0CG48 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms