Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 PVRIG2P-201ENST00000435460 978 ntBASIC16.66■□□□□ 0.26
FREM3P0C091 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.66■□□□□ 0.26
FREM3P0C091 TPSP2-201ENST00000561760 610 ntBASIC16.66■□□□□ 0.26
FREM3P0C091 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.66■□□□□ 0.26
FREM3P0C091 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
FREM3P0C091 AC024563.2-201ENST00000603282 481 ntBASIC16.66■□□□□ 0.26
FREM3P0C091 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FREM3P0C091 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.65■□□□□ 0.26
FREM3P0C091 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.65■□□□□ 0.26
FREM3P0C091 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FREM3P0C091 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.65■□□□□ 0.26
FREM3P0C091 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.65■□□□□ 0.26
FREM3P0C091 IFNL4P1-201ENST00000607083 540 ntBASIC16.65■□□□□ 0.26
FREM3P0C091 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.65■□□□□ 0.26
FREM3P0C091 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FREM3P0C091 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FREM3P0C091 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
FREM3P0C091 AC016734.2-201ENST00000624325 1377 ntBASIC16.65■□□□□ 0.26
FREM3P0C091 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.65■□□□□ 0.26
FREM3P0C091 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.65■□□□□ 0.26
FREM3P0C091 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
FREM3P0C091 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
FREM3P0C091 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.64■□□□□ 0.25
FREM3P0C091 CHCHD2P8-201ENST00000429873 447 ntBASIC16.64■□□□□ 0.25
FREM3P0C091 KRT18P56-201ENST00000507275 550 ntBASIC16.64■□□□□ 0.25
FREM3P0C091 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
FREM3P0C091 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.64■□□□□ 0.25
FREM3P0C091 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
FREM3P0C091 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.64■□□□□ 0.25
FREM3P0C091 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.64■□□□□ 0.25
FREM3P0C091 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.64■□□□□ 0.25
FREM3P0C091 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
FREM3P0C091 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
FREM3P0C091 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
FREM3P0C091 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
FREM3P0C091 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.63■□□□□ 0.25
FREM3P0C091 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
FREM3P0C091 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
FREM3P0C091 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.63■□□□□ 0.25
FREM3P0C091 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.63■□□□□ 0.25
FREM3P0C091 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
FREM3P0C091 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
FREM3P0C091 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
FREM3P0C091 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
FREM3P0C091 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms