Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC6P09630 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXC6P09630 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HOXC6P09630 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HOXC6P09630 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC6P09630 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXC6P09630 AC092865.5-201ENST00000545435 363 ntBASIC20.68■□□□□ 0.9
HOXC6P09630 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC6P09630 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC6P09630 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC6P09630 TERC-201ENST00000602385 541 ntBASIC20.68■□□□□ 0.9
HOXC6P09630 AL138831.2-201ENST00000606564 490 ntBASIC20.68■□□□□ 0.9
HOXC6P09630 AC116407.3-201ENST00000623905 1129 ntBASIC20.68■□□□□ 0.9
HOXC6P09630 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXC6P09630 ZNF259P1-201ENST00000407656 1365 ntBASIC20.68■□□□□ 0.9
HOXC6P09630 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXC6P09630 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HOXC6P09630 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXC6P09630 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC6P09630 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXC6P09630 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC6P09630 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC6P09630 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXC6P09630 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC6P09630 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC6P09630 RPS2P28-201ENST00000314255 741 ntBASIC20.67■□□□□ 0.9
HOXC6P09630 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 MIR1233-2-201ENST00000408138 82 ntBASIC20.67■□□□□ 0.9
HOXC6P09630 MIR1233-1-201ENST00000408722 82 ntBASIC20.67■□□□□ 0.9
HOXC6P09630 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.67■□□□□ 0.9
HOXC6P09630 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.67■□□□□ 0.9
HOXC6P09630 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC6P09630 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HOXC6P09630 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC6P09630 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HOXC6P09630 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC6P09630 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC6P09630 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 AC005332.7-201ENST00000614046 2005 ntBASIC20.66■□□□□ 0.9
HOXC6P09630 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXC6P09630 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXC6P09630 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HOXC6P09630 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
HOXC6P09630 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC6P09630 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.66■□□□□ 0.9
HOXC6P09630 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC6P09630 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC6P09630 AC145285.3-201ENST00000564603 959 ntBASIC20.66■□□□□ 0.9
HOXC6P09630 AC011467.2-201ENST00000598425 242 ntBASIC20.66■□□□□ 0.9
HOXC6P09630 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 AC009154.2-201ENST00000621177 724 ntBASIC20.66■□□□□ 0.9
HOXC6P09630 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXC6P09630 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXC6P09630 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
HOXC6P09630 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
HOXC6P09630 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC6P09630 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC6P09630 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXC6P09630 BX842568.4-201ENST00000421222 227 ntBASIC20.65■□□□□ 0.9
HOXC6P09630 AC092183.1-201ENST00000469884 875 ntBASIC20.65■□□□□ 0.9
HOXC6P09630 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.65■□□□□ 0.9
HOXC6P09630 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXC6P09630 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC6P09630 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms