Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A2P08572 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A2P08572 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.43■□□□□ 0.54
COL4A2P08572 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COL4A2P08572 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A2P08572 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A2P08572 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A2P08572 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
COL4A2P08572 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.43■□□□□ 0.54
COL4A2P08572 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A2P08572 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.43■□□□□ 0.54
COL4A2P08572 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A2P08572 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.43■□□□□ 0.54
COL4A2P08572 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A2P08572 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A2P08572 AL499627.1-201ENST00000569373 2188 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL4A2P08572 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A2P08572 AL356309.3-201ENST00000624132 1934 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
COL4A2P08572 AP002414.3-201ENST00000589352 1468 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.42■□□□□ 0.54
COL4A2P08572 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL4A2P08572 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 GPX1P2-201ENST00000429271 606 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 AC007967.2-201ENST00000432613 625 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A2P08572 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.42■□□□□ 0.54
COL4A2P08572 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A2P08572 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 AC027601.4-201ENST00000611259 610 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.42■□□□□ 0.54
COL4A2P08572 AC093484.2-201ENST00000580996 2166 ntBASIC18.42■□□□□ 0.54
COL4A2P08572 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.42■□□□□ 0.54
COL4A2P08572 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL4A2P08572 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A2P08572 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A2P08572 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
COL4A2P08572 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A2P08572 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A2P08572 AC112698.1-201ENST00000510299 916 ntBASIC18.41■□□□□ 0.54
COL4A2P08572 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A2P08572 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A2P08572 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
COL4A2P08572 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.41■□□□□ 0.54
COL4A2P08572 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A2P08572 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.41■□□□□ 0.54
COL4A2P08572 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A2P08572 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A2P08572 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A2P08572 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A2P08572 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A2P08572 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.4■□□□□ 0.54
COL4A2P08572 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COL4A2P08572 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A2P08572 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL4A2P08572 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.4■□□□□ 0.54
COL4A2P08572 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.4■□□□□ 0.54
COL4A2P08572 AC107918.4-202ENST00000641623 219 ntBASIC18.4■□□□□ 0.54
COL4A2P08572 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL4A2P08572 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A2P08572 PMS2P2-201ENST00000425039 1128 ntBASIC18.4■□□□□ 0.54
COL4A2P08572 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A2P08572 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A2P08572 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.4■□□□□ 0.54
COL4A2P08572 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.4■□□□□ 0.54
COL4A2P08572 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A2P08572 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms