Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MMP2P08253 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.47■□□□□ 0.55
MMP2P08253 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
MMP2P08253 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MMP2P08253 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP2P08253 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP2P08253 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP2P08253 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP2P08253 HBZP1-201ENST00000354915 429 ntBASIC18.46■□□□□ 0.55
MMP2P08253 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP2P08253 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP2P08253 SPDYE13P-201ENST00000445314 798 ntBASIC18.46■□□□□ 0.55
MMP2P08253 AC112907.2-201ENST00000448639 330 ntBASIC18.46■□□□□ 0.55
MMP2P08253 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.46■□□□□ 0.55
MMP2P08253 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP2P08253 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.46■□□□□ 0.55
MMP2P08253 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP2P08253 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.46■□□□□ 0.55
MMP2P08253 AC007613.1-201ENST00000572811 2597 ntBASIC18.46■□□□□ 0.55
MMP2P08253 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
MMP2P08253 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MMP2P08253 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
MMP2P08253 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
MMP2P08253 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP2P08253 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.45■□□□□ 0.54
MMP2P08253 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP2P08253 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP2P08253 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP2P08253 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.45■□□□□ 0.54
MMP2P08253 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 AC092647.4-201ENST00000457211 535 ntBASIC18.45■□□□□ 0.54
MMP2P08253 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
MMP2P08253 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP2P08253 REXO1L9P-201ENST00000604264 2108 ntBASIC18.45■□□□□ 0.54
MMP2P08253 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP2P08253 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MMP2P08253 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.45■□□□□ 0.54
MMP2P08253 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MMP2P08253 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MMP2P08253 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP2P08253 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP2P08253 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.44■□□□□ 0.54
MMP2P08253 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.44■□□□□ 0.54
MMP2P08253 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.44■□□□□ 0.54
MMP2P08253 AC083849.1-201ENST00000615227 514 ntBASIC18.44■□□□□ 0.54
MMP2P08253 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.44■□□□□ 0.54
MMP2P08253 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MMP2P08253 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms