Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.06■■□□□ 1.44
COL5A2P05997 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL5A2P05997 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC24.06■■□□□ 1.44
COL5A2P05997 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.06■■□□□ 1.44
COL5A2P05997 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.06■■□□□ 1.44
COL5A2P05997 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
COL5A2P05997 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC24.06■■□□□ 1.44
COL5A2P05997 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
COL5A2P05997 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL5A2P05997 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL5A2P05997 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.06■■□□□ 1.44
COL5A2P05997 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC24.06■■□□□ 1.44
COL5A2P05997 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
COL5A2P05997 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC24.06■■□□□ 1.44
COL5A2P05997 AP000867.4-201ENST00000641616 219 ntBASIC24.06■■□□□ 1.44
COL5A2P05997 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL5A2P05997 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.06■■□□□ 1.44
COL5A2P05997 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
COL5A2P05997 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.05■■□□□ 1.44
COL5A2P05997 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.05■■□□□ 1.44
COL5A2P05997 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.05■■□□□ 1.44
COL5A2P05997 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
COL5A2P05997 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC24.05■■□□□ 1.44
COL5A2P05997 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL5A2P05997 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
COL5A2P05997 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.05■■□□□ 1.44
COL5A2P05997 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.05■■□□□ 1.44
COL5A2P05997 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
COL5A2P05997 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 SNAI3-AS1-205ENST00000568633 2096 ntBASIC24.04■■□□□ 1.44
COL5A2P05997 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
COL5A2P05997 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC24.04■■□□□ 1.44
COL5A2P05997 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
COL5A2P05997 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC24.04■■□□□ 1.44
COL5A2P05997 COPE-211ENST00000600932 1144 ntTSL 5 BASIC24.04■■□□□ 1.44
COL5A2P05997 AC079781.4-201ENST00000641908 219 ntBASIC24.04■■□□□ 1.44
COL5A2P05997 MYLKP1-201ENST00000509077 1580 ntBASIC24.04■■□□□ 1.44
COL5A2P05997 LINC01126-201ENST00000623515 1646 ntBASIC24.04■■□□□ 1.44
COL5A2P05997 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL5A2P05997 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.04■■□□□ 1.44
COL5A2P05997 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 BEX3-201ENST00000361298 921 ntTSL 2 BASIC24.03■■□□□ 1.44
COL5A2P05997 AC023274.1-201ENST00000418278 595 ntBASIC24.03■■□□□ 1.44
COL5A2P05997 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC24.03■■□□□ 1.44
COL5A2P05997 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC24.03■■□□□ 1.44
COL5A2P05997 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL5A2P05997 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
COL5A2P05997 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
COL5A2P05997 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL5A2P05997 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL5A2P05997 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.02■■□□□ 1.44
COL5A2P05997 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.02■■□□□ 1.44
COL5A2P05997 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL5A2P05997 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL5A2P05997 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.02■■□□□ 1.44
COL5A2P05997 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.02■■□□□ 1.44
COL5A2P05997 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC24.02■■□□□ 1.44
COL5A2P05997 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.02■■□□□ 1.44
COL5A2P05997 AC064836.3-201ENST00000607928 673 ntBASIC24.02■■□□□ 1.44
COL5A2P05997 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
COL5A2P05997 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
COL5A2P05997 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.02■■□□□ 1.44
COL5A2P05997 AC079776.2-201ENST00000641154 1609 ntBASIC24.02■■□□□ 1.44
COL5A2P05997 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.01■■□□□ 1.43
COL5A2P05997 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
COL5A2P05997 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC24.01■■□□□ 1.43
COL5A2P05997 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
COL5A2P05997 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL5A2P05997 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
COL5A2P05997 AC112698.1-201ENST00000510299 916 ntBASIC24.01■■□□□ 1.43
COL5A2P05997 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC24.01■■□□□ 1.43
COL5A2P05997 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC24.01■■□□□ 1.43
COL5A2P05997 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
COL5A2P05997 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms