Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.4□□□□□ -0.58
APOBP04114 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
APOBP04114 RNA5SP416-201ENST00000516838 111 ntBASIC11.4□□□□□ -0.58
APOBP04114 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.4□□□□□ -0.58
APOBP04114 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.4□□□□□ -0.58
APOBP04114 AC009154.2-201ENST00000621177 724 ntBASIC11.4□□□□□ -0.58
APOBP04114 AC004706.3-202ENST00000621574 984 ntBASIC11.4□□□□□ -0.58
APOBP04114 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
APOBP04114 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
APOBP04114 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
APOBP04114 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.4□□□□□ -0.59
APOBP04114 COX20P2-201ENST00000452636 358 ntBASIC11.4□□□□□ -0.59
APOBP04114 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.4□□□□□ -0.59
APOBP04114 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.4□□□□□ -0.59
APOBP04114 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
APOBP04114 AC093028.1-201ENST00000622998 982 ntBASIC11.4□□□□□ -0.59
APOBP04114 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.39□□□□□ -0.59
APOBP04114 HEIH-201ENST00000623091 1652 ntBASIC11.39□□□□□ -0.59
APOBP04114 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 AC006504.4-201ENST00000592118 1568 ntBASIC11.39□□□□□ -0.59
APOBP04114 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.39□□□□□ -0.59
APOBP04114 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.39□□□□□ -0.59
APOBP04114 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.39□□□□□ -0.59
APOBP04114 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 SIGLEC16-201ENST00000599858 1437 ntBASIC11.39□□□□□ -0.59
APOBP04114 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.39□□□□□ -0.59
APOBP04114 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.39□□□□□ -0.59
APOBP04114 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
APOBP04114 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
APOBP04114 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC11.39□□□□□ -0.59
APOBP04114 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
APOBP04114 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 PMPCAP1-201ENST00000508114 1576 ntBASIC11.39□□□□□ -0.59
APOBP04114 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 AC079776.2-201ENST00000641154 1609 ntBASIC11.39□□□□□ -0.59
APOBP04114 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.39□□□□□ -0.59
APOBP04114 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 VN2R19P-201ENST00000442399 1052 ntBASIC11.39□□□□□ -0.59
APOBP04114 HCG4B-203ENST00000450128 991 ntBASIC11.39□□□□□ -0.59
APOBP04114 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.39□□□□□ -0.59
APOBP04114 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.39□□□□□ -0.59
APOBP04114 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 AC008735.5-201ENST00000623544 497 ntBASIC11.39□□□□□ -0.59
APOBP04114 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOBP04114 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 LINC01006-201ENST00000333319 2292 ntBASIC11.38□□□□□ -0.59
APOBP04114 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 AC105339.3-201ENST00000560043 636 ntBASIC11.38□□□□□ -0.59
APOBP04114 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.38□□□□□ -0.59
APOBP04114 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.38□□□□□ -0.59
APOBP04114 AC068587.9-201ENST00000641814 219 ntBASIC11.38□□□□□ -0.59
APOBP04114 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 MKNK2P1-201ENST00000437526 628 ntBASIC11.38□□□□□ -0.59
APOBP04114 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 SNHG9-202ENST00000564014 471 ntBASIC11.38□□□□□ -0.59
APOBP04114 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.38□□□□□ -0.59
APOBP04114 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms