Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.92■□□□□ 0.78
CHRNA1P02708 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNA1P02708 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.92■□□□□ 0.78
CHRNA1P02708 AP001005.1-201ENST00000571755 1248 ntBASIC19.92■□□□□ 0.78
CHRNA1P02708 AL773604.1-201ENST00000617417 272 ntBASIC19.92■□□□□ 0.78
CHRNA1P02708 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.92■□□□□ 0.78
CHRNA1P02708 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNA1P02708 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA1P02708 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA1P02708 MTCL1P1-201ENST00000446207 792 ntBASIC19.91■□□□□ 0.78
CHRNA1P02708 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRNA1P02708 AC008608.2-201ENST00000606089 416 ntBASIC19.91■□□□□ 0.78
CHRNA1P02708 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA1P02708 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA1P02708 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA1P02708 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA1P02708 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA1P02708 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 LINC00602-201ENST00000629776 2065 ntBASIC19.9■□□□□ 0.78
CHRNA1P02708 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.9■□□□□ 0.78
CHRNA1P02708 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 KRT18P67-201ENST00000432816 1264 ntBASIC19.9■□□□□ 0.78
CHRNA1P02708 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 AC009154.2-201ENST00000621177 724 ntBASIC19.9■□□□□ 0.78
CHRNA1P02708 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 AF228730.7-201ENST00000641842 219 ntBASIC19.9■□□□□ 0.78
CHRNA1P02708 IL9RP2-201ENST00000423948 1312 ntBASIC19.9■□□□□ 0.78
CHRNA1P02708 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHRNA1P02708 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA1P02708 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA1P02708 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHRNA1P02708 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CHRNA1P02708 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CHRNA1P02708 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CHRNA1P02708 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA1P02708 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 AL031284.1-201ENST00000419297 478 ntBASIC19.89■□□□□ 0.77
CHRNA1P02708 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA1P02708 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CHRNA1P02708 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA1P02708 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms