Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB2O95900 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB2O95900 MIR1224-201ENST00000408193 85 ntBASIC19.24■□□□□ 0.67
TRUB2O95900 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.24■□□□□ 0.67
TRUB2O95900 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.24■□□□□ 0.67
TRUB2O95900 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.24■□□□□ 0.67
TRUB2O95900 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB2O95900 LINC01238-205ENST00000567549 1107 ntBASIC19.24■□□□□ 0.67
TRUB2O95900 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB2O95900 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.24■□□□□ 0.67
TRUB2O95900 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.24■□□□□ 0.67
TRUB2O95900 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TRUB2O95900 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.24■□□□□ 0.67
TRUB2O95900 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.24■□□□□ 0.67
TRUB2O95900 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRUB2O95900 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.24■□□□□ 0.67
TRUB2O95900 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRUB2O95900 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRUB2O95900 ESPNP-201ENST00000270691 2015 ntBASIC19.24■□□□□ 0.67
TRUB2O95900 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.23■□□□□ 0.67
TRUB2O95900 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRUB2O95900 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.23■□□□□ 0.67
TRUB2O95900 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 AC010331.1-201ENST00000611423 582 ntBASIC19.23■□□□□ 0.67
TRUB2O95900 AL590326.2-201ENST00000625139 305 ntBASIC19.23■□□□□ 0.67
TRUB2O95900 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRUB2O95900 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRUB2O95900 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRUB2O95900 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.23■□□□□ 0.67
TRUB2O95900 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB2O95900 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.23■□□□□ 0.67
TRUB2O95900 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRUB2O95900 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.22■□□□□ 0.67
TRUB2O95900 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 AC093677.2-201ENST00000600169 1863 ntBASIC19.22■□□□□ 0.67
TRUB2O95900 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.22■□□□□ 0.67
TRUB2O95900 AC020763.4-201ENST00000623414 4170 ntBASIC19.22■□□□□ 0.67
TRUB2O95900 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRUB2O95900 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.22■□□□□ 0.67
TRUB2O95900 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRUB2O95900 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.22■□□□□ 0.67
TRUB2O95900 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.22■□□□□ 0.67
TRUB2O95900 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.22■□□□□ 0.67
TRUB2O95900 NTF6B-201ENST00000591913 560 ntBASIC19.22■□□□□ 0.67
TRUB2O95900 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 AC099343.3-201ENST00000605834 2503 ntBASIC19.22■□□□□ 0.67
TRUB2O95900 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRUB2O95900 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRUB2O95900 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
TRUB2O95900 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRUB2O95900 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB2O95900 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
TRUB2O95900 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRUB2O95900 AC009065.1-201ENST00000564055 1225 ntBASIC19.21■□□□□ 0.67
TRUB2O95900 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.21■□□□□ 0.67
TRUB2O95900 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.21■□□□□ 0.67
TRUB2O95900 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.21■□□□□ 0.67
TRUB2O95900 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.21■□□□□ 0.67
TRUB2O95900 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRUB2O95900 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB2O95900 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms