Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF3O95398 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 PNKD-204ENST00000436005 978 ntTSL 5 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 AC008687.5-201ENST00000593746 558 ntBASIC27.39■■□□□ 1.98
RAPGEF3O95398 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC27.39■■□□□ 1.98
RAPGEF3O95398 AC004817.3-201ENST00000602957 2129 ntBASIC27.39■■□□□ 1.98
RAPGEF3O95398 HEIH-201ENST00000623091 1652 ntBASIC27.39■■□□□ 1.97
RAPGEF3O95398 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
RAPGEF3O95398 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.39■■□□□ 1.97
RAPGEF3O95398 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
RAPGEF3O95398 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF3O95398 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF3O95398 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF3O95398 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 ELL2P1-201ENST00000413990 1906 ntBASIC27.38■■□□□ 1.97
RAPGEF3O95398 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF3O95398 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF3O95398 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF3O95398 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 AC018845.2-201ENST00000568326 409 ntBASIC27.38■■□□□ 1.97
RAPGEF3O95398 AL096865.1-201ENST00000606796 927 ntBASIC27.38■■□□□ 1.97
RAPGEF3O95398 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
RAPGEF3O95398 AC079776.2-201ENST00000641154 1609 ntBASIC27.38■■□□□ 1.97
RAPGEF3O95398 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC27.37■■□□□ 1.97
RAPGEF3O95398 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC27.37■■□□□ 1.97
RAPGEF3O95398 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC27.37■■□□□ 1.97
RAPGEF3O95398 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
RAPGEF3O95398 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC27.37■■□□□ 1.97
RAPGEF3O95398 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF3O95398 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 LINC00602-201ENST00000629776 2065 ntBASIC27.36■■□□□ 1.97
RAPGEF3O95398 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 AL139400.1-201ENST00000366220 510 ntBASIC27.36■■□□□ 1.97
RAPGEF3O95398 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 SLC4A1APP2-201ENST00000424054 1259 ntBASIC27.36■■□□□ 1.97
RAPGEF3O95398 SRP19-202ENST00000445150 833 ntTSL 2 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 PGM5P2-202ENST00000637225 1043 ntBASIC27.36■■□□□ 1.97
RAPGEF3O95398 AL022326.1-202ENST00000641533 845 ntBASIC27.36■■□□□ 1.97
RAPGEF3O95398 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF3O95398 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
RAPGEF3O95398 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF3O95398 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF3O95398 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF3O95398 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 AC136632.2-201ENST00000512891 861 ntBASIC27.35■■□□□ 1.97
RAPGEF3O95398 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 PRR29-209ENST00000582540 967 ntTSL 2 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF3O95398 AC009102.3-201ENST00000623118 1491 ntBASIC27.35■■□□□ 1.97
RAPGEF3O95398 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.35■■□□□ 1.97
RAPGEF3O95398 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF3O95398 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF3O95398 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF3O95398 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF3O95398 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 PTMS-202ENST00000389462 773 ntTSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 MKNK2P1-201ENST00000437526 628 ntBASIC27.34■■□□□ 1.97
RAPGEF3O95398 PAWRP1-201ENST00000451083 565 ntBASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms