Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 NOC2LP1-202ENST00000452600 2235 ntBASIC16.94■□□□□ 0.3
NKX2-2O95096 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NKX2-2O95096 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
NKX2-2O95096 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 AL096828.2-201ENST00000567259 1965 ntBASIC16.93■□□□□ 0.3
NKX2-2O95096 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX2-2O95096 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NKX2-2O95096 YBX1P2-201ENST00000489612 999 ntBASIC16.93■□□□□ 0.3
NKX2-2O95096 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX2-2O95096 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.93■□□□□ 0.3
NKX2-2O95096 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NKX2-2O95096 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
NKX2-2O95096 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NKX2-2O95096 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NKX2-2O95096 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.93■□□□□ 0.3
NKX2-2O95096 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.93■□□□□ 0.3
NKX2-2O95096 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
NKX2-2O95096 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NKX2-2O95096 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NKX2-2O95096 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.92■□□□□ 0.3
NKX2-2O95096 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-2O95096 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-2O95096 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.92■□□□□ 0.3
NKX2-2O95096 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NKX2-2O95096 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.92■□□□□ 0.3
NKX2-2O95096 AC117947.1-201ENST00000427448 529 ntBASIC16.92■□□□□ 0.3
NKX2-2O95096 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.92■□□□□ 0.3
NKX2-2O95096 KRT18P57-201ENST00000443599 1254 ntBASIC16.92■□□□□ 0.3
NKX2-2O95096 RASA4DP-201ENST00000460726 1199 ntBASIC16.92■□□□□ 0.3
NKX2-2O95096 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.92■□□□□ 0.3
NKX2-2O95096 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX2-2O95096 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NKX2-2O95096 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NKX2-2O95096 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
NKX2-2O95096 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.92■□□□□ 0.3
NKX2-2O95096 AC093010.1-201ENST00000473625 1624 ntBASIC16.92■□□□□ 0.3
NKX2-2O95096 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NKX2-2O95096 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NKX2-2O95096 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NKX2-2O95096 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NKX2-2O95096 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.91■□□□□ 0.3
NKX2-2O95096 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NKX2-2O95096 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.91■□□□□ 0.3
NKX2-2O95096 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NKX2-2O95096 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.91■□□□□ 0.3
NKX2-2O95096 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms