Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC24.24■■□□□ 1.47
LTN1O94822 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
LTN1O94822 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.24■■□□□ 1.47
LTN1O94822 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC24.24■■□□□ 1.47
LTN1O94822 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 AC132008.2-207ENST00000454517 770 ntBASIC24.24■■□□□ 1.47
LTN1O94822 AC010327.4-202ENST00000591484 748 ntBASIC24.24■■□□□ 1.47
LTN1O94822 AC140113.2-201ENST00000604370 208 ntBASIC24.24■■□□□ 1.47
LTN1O94822 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
LTN1O94822 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
LTN1O94822 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC24.23■■□□□ 1.47
LTN1O94822 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.23■■□□□ 1.47
LTN1O94822 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.23■■□□□ 1.47
LTN1O94822 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 KRT8P47-201ENST00000604727 1398 ntBASIC24.23■■□□□ 1.47
LTN1O94822 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.23■■□□□ 1.47
LTN1O94822 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC24.23■■□□□ 1.47
LTN1O94822 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
LTN1O94822 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC24.23■■□□□ 1.47
LTN1O94822 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC24.23■■□□□ 1.47
LTN1O94822 TERC-201ENST00000602385 541 ntBASIC24.23■■□□□ 1.47
LTN1O94822 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LTN1O94822 AC073130.3-201ENST00000624389 2278 ntBASIC24.23■■□□□ 1.47
LTN1O94822 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC24.22■■□□□ 1.47
LTN1O94822 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.22■■□□□ 1.47
LTN1O94822 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.22■■□□□ 1.47
LTN1O94822 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC24.22■■□□□ 1.47
LTN1O94822 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 COX10-202ENST00000429152 875 ntTSL 2 BASIC24.22■■□□□ 1.47
LTN1O94822 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
LTN1O94822 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC24.22■■□□□ 1.47
LTN1O94822 OR7E14P-202ENST00000530490 1290 ntBASIC24.22■■□□□ 1.47
LTN1O94822 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.22■■□□□ 1.47
LTN1O94822 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC24.22■■□□□ 1.47
LTN1O94822 PIN1-206ENST00000587625 878 ntTSL 2 BASIC24.22■■□□□ 1.47
LTN1O94822 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
LTN1O94822 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC24.22■■□□□ 1.47
LTN1O94822 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
LTN1O94822 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
LTN1O94822 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LTN1O94822 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC24.21■■□□□ 1.47
LTN1O94822 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.21■■□□□ 1.47
LTN1O94822 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.21■■□□□ 1.47
LTN1O94822 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.21■■□□□ 1.47
LTN1O94822 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC24.21■■□□□ 1.47
LTN1O94822 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.21■■□□□ 1.47
LTN1O94822 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC24.21■■□□□ 1.47
LTN1O94822 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC24.21■■□□□ 1.47
LTN1O94822 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LTN1O94822 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.21■■□□□ 1.47
LTN1O94822 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC24.21■■□□□ 1.47
LTN1O94822 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
LTN1O94822 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.21■■□□□ 1.47
LTN1O94822 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
LTN1O94822 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
LTN1O94822 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
LTN1O94822 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
LTN1O94822 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.21■■□□□ 1.47
LTN1O94822 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC24.21■■□□□ 1.47
LTN1O94822 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC24.21■■□□□ 1.47
LTN1O94822 AC008735.5-201ENST00000623544 497 ntBASIC24.21■■□□□ 1.47
LTN1O94822 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC24.21■■□□□ 1.47
LTN1O94822 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.2■■□□□ 1.47
LTN1O94822 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
LTN1O94822 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 NMU-202ENST00000505262 693 ntTSL 3 BASIC24.2■■□□□ 1.46
LTN1O94822 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.2■■□□□ 1.46
LTN1O94822 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LTN1O94822 AC025062.2-201ENST00000605477 670 ntBASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms