Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.61■□□□□ 0.57
TRIOO75962 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIOO75962 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIOO75962 AC107918.4-202ENST00000641623 219 ntBASIC18.61■□□□□ 0.57
TRIOO75962 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIOO75962 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.61■□□□□ 0.57
TRIOO75962 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIOO75962 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.61■□□□□ 0.57
TRIOO75962 TCF3P1-201ENST00000423021 1937 ntBASIC18.61■□□□□ 0.57
TRIOO75962 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIOO75962 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIOO75962 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.61■□□□□ 0.57
TRIOO75962 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRIOO75962 KRT8P50-201ENST00000562022 1438 ntBASIC18.61■□□□□ 0.57
TRIOO75962 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRIOO75962 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.6■□□□□ 0.57
TRIOO75962 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.6■□□□□ 0.57
TRIOO75962 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
TRIOO75962 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIOO75962 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIOO75962 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIOO75962 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIOO75962 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRIOO75962 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIOO75962 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.6■□□□□ 0.57
TRIOO75962 AC113404.2-201ENST00000507884 177 ntBASIC18.6■□□□□ 0.57
TRIOO75962 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIOO75962 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIOO75962 ELL2P1-201ENST00000413990 1906 ntBASIC18.6■□□□□ 0.57
TRIOO75962 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIOO75962 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIOO75962 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIOO75962 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIOO75962 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIOO75962 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIOO75962 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.59■□□□□ 0.57
TRIOO75962 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 IRX1P1-201ENST00000438849 1838 ntBASIC18.59■□□□□ 0.57
TRIOO75962 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRIOO75962 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIOO75962 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIOO75962 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIOO75962 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIOO75962 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIOO75962 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIOO75962 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIOO75962 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIOO75962 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIOO75962 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIOO75962 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIOO75962 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIOO75962 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIOO75962 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIOO75962 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIOO75962 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIOO75962 KRT8P32-201ENST00000512863 1461 ntBASIC18.58■□□□□ 0.56
TRIOO75962 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIOO75962 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIOO75962 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIOO75962 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIOO75962 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRIOO75962 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
TRIOO75962 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIOO75962 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIOO75962 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIOO75962 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIOO75962 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIOO75962 AC108751.1-201ENST00000490852 363 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms