Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PRPF40AO75400 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.36■■□□□ 1.01
PRPF40AO75400 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PRPF40AO75400 AC233263.1-201ENST00000578059 224 ntBASIC21.36■■□□□ 1.01
PRPF40AO75400 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.36■■□□□ 1.01
PRPF40AO75400 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.36■■□□□ 1.01
PRPF40AO75400 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRPF40AO75400 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.36■■□□□ 1.01
PRPF40AO75400 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.35■■□□□ 1.01
PRPF40AO75400 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.35■■□□□ 1.01
PRPF40AO75400 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.35■■□□□ 1.01
PRPF40AO75400 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.35■■□□□ 1.01
PRPF40AO75400 RN7SL471P-201ENST00000580476 299 ntBASIC21.35■■□□□ 1.01
PRPF40AO75400 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.35■■□□□ 1.01
PRPF40AO75400 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 AL096828.2-201ENST00000567259 1965 ntBASIC21.35■■□□□ 1.01
PRPF40AO75400 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PRPF40AO75400 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRPF40AO75400 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRPF40AO75400 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PRPF40AO75400 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PRPF40AO75400 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.34■■□□□ 1.01
PRPF40AO75400 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.34■■□□□ 1.01
PRPF40AO75400 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.34■■□□□ 1.01
PRPF40AO75400 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.34■■□□□ 1.01
PRPF40AO75400 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.34■■□□□ 1.01
PRPF40AO75400 AC004264.1-201ENST00000608354 794 ntBASIC21.34■■□□□ 1.01
PRPF40AO75400 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.34■■□□□ 1.01
PRPF40AO75400 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PRPF40AO75400 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.34■■□□□ 1.01
PRPF40AO75400 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
PRPF40AO75400 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRPF40AO75400 RCC2P3-201ENST00000418112 1537 ntBASIC21.34■■□□□ 1.01
PRPF40AO75400 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPF40AO75400 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PRPF40AO75400 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPF40AO75400 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.33■■□□□ 1.01
PRPF40AO75400 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PRPF40AO75400 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PRPF40AO75400 AC093827.2-201ENST00000512654 315 ntBASIC21.33■■□□□ 1.01
PRPF40AO75400 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.33■■□□□ 1.01
PRPF40AO75400 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRPF40AO75400 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPF40AO75400 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.33■■□□□ 1.01
PRPF40AO75400 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.33■■□□□ 1.01
PRPF40AO75400 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPF40AO75400 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.33■■□□□ 1.01
PRPF40AO75400 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRPF40AO75400 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRPF40AO75400 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.33■■□□□ 1
PRPF40AO75400 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PRPF40AO75400 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
PRPF40AO75400 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRPF40AO75400 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms