Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF253O75346 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ZNF253O75346 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF253O75346 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
ZNF253O75346 KRT8P41-201ENST00000533985 1514 ntBASIC14.31□□□□□ -0.12
ZNF253O75346 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF253O75346 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF253O75346 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 AC008764.6-201ENST00000595909 2069 ntBASIC14.31□□□□□ -0.12
ZNF253O75346 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.31□□□□□ -0.12
ZNF253O75346 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF253O75346 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF253O75346 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.31□□□□□ -0.12
ZNF253O75346 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF253O75346 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF253O75346 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF253O75346 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ZNF253O75346 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF253O75346 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF253O75346 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.3□□□□□ -0.12
ZNF253O75346 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
ZNF253O75346 RCC2P6-201ENST00000526625 1557 ntBASIC14.3□□□□□ -0.12
ZNF253O75346 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF253O75346 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF253O75346 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
ZNF253O75346 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF253O75346 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.3□□□□□ -0.12
ZNF253O75346 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF253O75346 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF253O75346 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF253O75346 AC142086.2-201ENST00000569753 217 ntBASIC14.3□□□□□ -0.12
ZNF253O75346 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.3□□□□□ -0.12
ZNF253O75346 AC068587.9-201ENST00000641814 219 ntBASIC14.3□□□□□ -0.12
ZNF253O75346 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 LINC00896-202ENST00000609602 2128 ntBASIC14.3□□□□□ -0.12
ZNF253O75346 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF253O75346 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ZNF253O75346 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ZNF253O75346 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF253O75346 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF253O75346 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 AC126763.1-201ENST00000552015 2118 ntBASIC14.29□□□□□ -0.12
ZNF253O75346 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms