Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 NUDT16P1-203ENST00000513809 620 ntBASIC15.52■□□□□ 0.08
PDCD6O75340 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.52■□□□□ 0.08
PDCD6O75340 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PDCD6O75340 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PDCD6O75340 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.52■□□□□ 0.08
PDCD6O75340 MIR3180-5-201ENST00000583743 153 ntBASIC15.52■□□□□ 0.08
PDCD6O75340 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.52■□□□□ 0.08
PDCD6O75340 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.52■□□□□ 0.08
PDCD6O75340 AL096828.2-201ENST00000567259 1965 ntBASIC15.52■□□□□ 0.07
PDCD6O75340 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDCD6O75340 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.52■□□□□ 0.07
PDCD6O75340 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDCD6O75340 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.52■□□□□ 0.07
PDCD6O75340 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDCD6O75340 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PDCD6O75340 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDCD6O75340 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.52■□□□□ 0.07
PDCD6O75340 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PDCD6O75340 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDCD6O75340 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PDCD6O75340 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.51■□□□□ 0.07
PDCD6O75340 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.51■□□□□ 0.07
PDCD6O75340 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PDCD6O75340 FAM201B-201ENST00000458407 597 ntBASIC15.51■□□□□ 0.07
PDCD6O75340 AC097488.1-201ENST00000507834 756 ntBASIC15.51■□□□□ 0.07
PDCD6O75340 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PDCD6O75340 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PDCD6O75340 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PDCD6O75340 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PDCD6O75340 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.51■□□□□ 0.07
PDCD6O75340 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PDCD6O75340 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PDCD6O75340 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.5■□□□□ 0.07
PDCD6O75340 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PDCD6O75340 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.5■□□□□ 0.07
PDCD6O75340 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.5■□□□□ 0.07
PDCD6O75340 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.5■□□□□ 0.07
PDCD6O75340 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.5■□□□□ 0.07
PDCD6O75340 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.5■□□□□ 0.07
PDCD6O75340 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PDCD6O75340 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.5■□□□□ 0.07
PDCD6O75340 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PDCD6O75340 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PDCD6O75340 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
PDCD6O75340 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 PHGDH-209ENST00000641074 1780 ntBASIC15.49■□□□□ 0.07
PDCD6O75340 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.49■□□□□ 0.07
PDCD6O75340 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PDCD6O75340 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PDCD6O75340 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms