Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GFRA3O60609 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GFRA3O60609 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GFRA3O60609 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GFRA3O60609 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GFRA3O60609 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.76■□□□□ 0.43
GFRA3O60609 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.76■□□□□ 0.43
GFRA3O60609 ATP5G2P4-201ENST00000442175 420 ntBASIC17.76■□□□□ 0.43
GFRA3O60609 AC023141.5-201ENST00000458585 616 ntBASIC17.76■□□□□ 0.43
GFRA3O60609 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.76■□□□□ 0.43
GFRA3O60609 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.76■□□□□ 0.43
GFRA3O60609 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GFRA3O60609 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.76■□□□□ 0.43
GFRA3O60609 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GFRA3O60609 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GFRA3O60609 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.76■□□□□ 0.43
GFRA3O60609 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
GFRA3O60609 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GFRA3O60609 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GFRA3O60609 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GFRA3O60609 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
GFRA3O60609 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GFRA3O60609 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.75■□□□□ 0.43
GFRA3O60609 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.75■□□□□ 0.43
GFRA3O60609 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.75■□□□□ 0.43
GFRA3O60609 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.75■□□□□ 0.43
GFRA3O60609 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.75■□□□□ 0.43
GFRA3O60609 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.75■□□□□ 0.43
GFRA3O60609 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GFRA3O60609 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.75■□□□□ 0.43
GFRA3O60609 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.75■□□□□ 0.43
GFRA3O60609 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.75■□□□□ 0.43
GFRA3O60609 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GFRA3O60609 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
GFRA3O60609 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
GFRA3O60609 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.74■□□□□ 0.43
GFRA3O60609 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.74■□□□□ 0.43
GFRA3O60609 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.74■□□□□ 0.43
GFRA3O60609 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GFRA3O60609 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.74■□□□□ 0.43
GFRA3O60609 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GFRA3O60609 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.74■□□□□ 0.43
GFRA3O60609 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.74■□□□□ 0.43
GFRA3O60609 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.74■□□□□ 0.43
GFRA3O60609 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.74■□□□□ 0.43
GFRA3O60609 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.74■□□□□ 0.43
GFRA3O60609 AC073592.5-201ENST00000624854 528 ntBASIC17.74■□□□□ 0.43
GFRA3O60609 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GFRA3O60609 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GFRA3O60609 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GFRA3O60609 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.73■□□□□ 0.43
GFRA3O60609 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.73■□□□□ 0.43
GFRA3O60609 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.73■□□□□ 0.43
GFRA3O60609 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
GFRA3O60609 MIR661-201ENST00000384842 89 ntBASIC17.73■□□□□ 0.43
GFRA3O60609 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.73■□□□□ 0.43
GFRA3O60609 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.73■□□□□ 0.43
GFRA3O60609 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.73■□□□□ 0.43
GFRA3O60609 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.73■□□□□ 0.43
GFRA3O60609 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.73■□□□□ 0.43
GFRA3O60609 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.73■□□□□ 0.43
GFRA3O60609 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GFRA3O60609 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.73■□□□□ 0.43
GFRA3O60609 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.73■□□□□ 0.43
GFRA3O60609 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms