Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 AL022342.1-201ENST00000400363 863 ntBASIC18.18■□□□□ 0.5
PCDHGA12O60330 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 AC008556.1-201ENST00000610908 2040 ntBASIC18.18■□□□□ 0.5
PCDHGA12O60330 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 AL032819.2-201ENST00000624543 2162 ntBASIC18.17■□□□□ 0.5
PCDHGA12O60330 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 AP002469.2-201ENST00000531724 424 ntBASIC18.17■□□□□ 0.5
PCDHGA12O60330 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 IGHV3-41-201ENST00000613121 348 ntBASIC18.17■□□□□ 0.5
PCDHGA12O60330 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA12O60330 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA12O60330 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.16■□□□□ 0.5
PCDHGA12O60330 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 MIR564-202ENST00000385049 94 ntBASIC18.16■□□□□ 0.5
PCDHGA12O60330 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 SLC25A6P4-201ENST00000586535 553 ntBASIC18.16■□□□□ 0.5
PCDHGA12O60330 Z69720.1-201ENST00000601483 472 ntBASIC18.16■□□□□ 0.5
PCDHGA12O60330 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA12O60330 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA12O60330 AC233702.3-201ENST00000578656 1387 ntBASIC18.16■□□□□ 0.5
PCDHGA12O60330 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGA12O60330 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGA12O60330 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms