Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2AO43633 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMP2AO43633 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2AO43633 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMP2AO43633 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2AO43633 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMP2AO43633 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2AO43633 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMP2AO43633 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMP2AO43633 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP2AO43633 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP2AO43633 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHMP2AO43633 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP2AO43633 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP2AO43633 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHMP2AO43633 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP2AO43633 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP2AO43633 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP2AO43633 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.6■□□□□ 0.89
CHMP2AO43633 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.6■□□□□ 0.89
CHMP2AO43633 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP2AO43633 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 AC011498.5-201ENST00000592027 486 ntBASIC20.6■□□□□ 0.89
CHMP2AO43633 AC024563.2-201ENST00000603282 481 ntBASIC20.6■□□□□ 0.89
CHMP2AO43633 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP2AO43633 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CHMP2AO43633 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP2AO43633 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP2AO43633 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHMP2AO43633 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHMP2AO43633 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMP2AO43633 KRT18P48-201ENST00000434763 852 ntBASIC20.59■□□□□ 0.89
CHMP2AO43633 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMP2AO43633 AP003733.1-201ENST00000491725 852 ntBASIC20.59■□□□□ 0.89
CHMP2AO43633 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMP2AO43633 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP2AO43633 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHMP2AO43633 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP2AO43633 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP2AO43633 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.58■□□□□ 0.89
CHMP2AO43633 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2AO43633 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2AO43633 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2AO43633 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CHMP2AO43633 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2AO43633 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2AO43633 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2AO43633 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CHMP2AO43633 Z83836.1-201ENST00000624605 1642 ntBASIC20.58■□□□□ 0.89
CHMP2AO43633 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2AO43633 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2AO43633 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2AO43633 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP2AO43633 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP2AO43633 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CHMP2AO43633 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
CHMP2AO43633 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.58■□□□□ 0.88
CHMP2AO43633 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMP2AO43633 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.58■□□□□ 0.88
CHMP2AO43633 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CHMP2AO43633 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP2AO43633 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP2AO43633 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP2AO43633 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms