Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RRP8O43159 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.22■□□□□ 0.35
RRP8O43159 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.22■□□□□ 0.35
RRP8O43159 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.22■□□□□ 0.35
RRP8O43159 YBX2P1-201ENST00000394192 760 ntBASIC17.22■□□□□ 0.35
RRP8O43159 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.22■□□□□ 0.35
RRP8O43159 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.22■□□□□ 0.35
RRP8O43159 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.22■□□□□ 0.35
RRP8O43159 IGHV3-22-201ENST00000520721 359 ntBASIC17.22■□□□□ 0.35
RRP8O43159 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
RRP8O43159 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.22■□□□□ 0.35
RRP8O43159 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
RRP8O43159 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.22■□□□□ 0.35
RRP8O43159 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.22■□□□□ 0.35
RRP8O43159 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
RRP8O43159 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.22■□□□□ 0.35
RRP8O43159 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RRP8O43159 TREX1-205ENST00000625293 1783 ntBASIC17.22■□□□□ 0.35
RRP8O43159 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RRP8O43159 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RRP8O43159 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.21■□□□□ 0.35
RRP8O43159 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.21■□□□□ 0.35
RRP8O43159 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.21■□□□□ 0.35
RRP8O43159 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.21■□□□□ 0.35
RRP8O43159 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.21■□□□□ 0.35
RRP8O43159 AC112907.3-201ENST00000577781 2400 ntBASIC17.21■□□□□ 0.35
RRP8O43159 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 AC006333.2-201ENST00000607957 2099 ntBASIC17.21■□□□□ 0.35
RRP8O43159 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RRP8O43159 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.21■□□□□ 0.35
RRP8O43159 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.21■□□□□ 0.35
RRP8O43159 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.21■□□□□ 0.35
RRP8O43159 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.21■□□□□ 0.35
RRP8O43159 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.21■□□□□ 0.35
RRP8O43159 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.21■□□□□ 0.35
RRP8O43159 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RRP8O43159 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RRP8O43159 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.2■□□□□ 0.34
RRP8O43159 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 RCN1P2-201ENST00000398357 915 ntBASIC17.2■□□□□ 0.34
RRP8O43159 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.2■□□□□ 0.34
RRP8O43159 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.2■□□□□ 0.34
RRP8O43159 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 RNA5SP416-201ENST00000516838 111 ntBASIC17.2■□□□□ 0.34
RRP8O43159 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.2■□□□□ 0.34
RRP8O43159 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
RRP8O43159 MIR3197-201ENST00000582241 73 ntBASIC17.2■□□□□ 0.34
RRP8O43159 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RRP8O43159 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.2■□□□□ 0.34
RRP8O43159 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.2■□□□□ 0.34
RRP8O43159 Z83851.2-201ENST00000609564 659 ntBASIC17.2■□□□□ 0.34
RRP8O43159 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.2■□□□□ 0.34
RRP8O43159 AC134684.3-201ENST00000641758 218 ntBASIC17.2■□□□□ 0.34
RRP8O43159 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RRP8O43159 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RRP8O43159 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.2■□□□□ 0.34
RRP8O43159 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.2■□□□□ 0.34
RRP8O43159 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RRP8O43159 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RRP8O43159 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.2■□□□□ 0.34
RRP8O43159 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.2■□□□□ 0.34
RRP8O43159 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RRP8O43159 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.19■□□□□ 0.34
RRP8O43159 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RRP8O43159 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
RRP8O43159 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms