Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 AL024508.2-201ENST00000607749 1894 ntBASIC20.98■□□□□ 0.95
ATP2A1O14983 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP2A1O14983 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP2A1O14983 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP2A1O14983 AL121912.1-201ENST00000603683 238 ntBASIC20.97■□□□□ 0.95
ATP2A1O14983 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2A1O14983 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2A1O14983 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP2A1O14983 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2A1O14983 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2A1O14983 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2A1O14983 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2A1O14983 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 AKR1C7P-201ENST00000305623 895 ntBASIC20.96■□□□□ 0.95
ATP2A1O14983 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ATP2A1O14983 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2A1O14983 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.96■□□□□ 0.95
ATP2A1O14983 AP002469.2-201ENST00000531724 424 ntBASIC20.96■□□□□ 0.95
ATP2A1O14983 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2A1O14983 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2A1O14983 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATP2A1O14983 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 REXO1L6P-202ENST00000619970 1078 ntBASIC20.96■□□□□ 0.95
ATP2A1O14983 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2A1O14983 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ATP2A1O14983 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2A1O14983 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2A1O14983 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2A1O14983 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
ATP2A1O14983 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATP2A1O14983 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ATP2A1O14983 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP2A1O14983 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP2A1O14983 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2A1O14983 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 BNIP3P18-201ENST00000593976 575 ntBASIC20.95■□□□□ 0.94
ATP2A1O14983 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.95■□□□□ 0.94
ATP2A1O14983 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATP2A1O14983 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP2A1O14983 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP2A1O14983 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2A1O14983 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ATP2A1O14983 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ATP2A1O14983 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A1O14983 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP2A1O14983 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ATP2A1O14983 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP2A1O14983 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms