Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC009102.3-201ENST00000623118 1491 ntBASIC17.63■□□□□ 0.41
CDX4O14627 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDX4O14627 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 LAGE3P1-201ENST00000425356 484 ntBASIC17.62■□□□□ 0.41
CDX4O14627 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.62■□□□□ 0.41
CDX4O14627 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.62■□□□□ 0.41
CDX4O14627 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.62■□□□□ 0.41
CDX4O14627 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.62■□□□□ 0.41
CDX4O14627 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDX4O14627 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDX4O14627 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDX4O14627 LINC01006-201ENST00000333319 2292 ntBASIC17.61■□□□□ 0.41
CDX4O14627 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDX4O14627 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDX4O14627 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CDX4O14627 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDX4O14627 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDX4O14627 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDX4O14627 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.61■□□□□ 0.41
CDX4O14627 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.61■□□□□ 0.41
CDX4O14627 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.61■□□□□ 0.41
CDX4O14627 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.61■□□□□ 0.41
CDX4O14627 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.61■□□□□ 0.41
CDX4O14627 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.61■□□□□ 0.41
CDX4O14627 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.61■□□□□ 0.41
CDX4O14627 AC064836.3-201ENST00000607928 673 ntBASIC17.61■□□□□ 0.41
CDX4O14627 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.61■□□□□ 0.41
CDX4O14627 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDX4O14627 AC099343.3-201ENST00000605834 2503 ntBASIC17.61■□□□□ 0.41
CDX4O14627 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.61■□□□□ 0.41
CDX4O14627 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDX4O14627 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
CDX4O14627 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDX4O14627 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 MCCD1P2-201ENST00000423228 335 ntBASIC17.6■□□□□ 0.41
CDX4O14627 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.6■□□□□ 0.41
CDX4O14627 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.6■□□□□ 0.41
CDX4O14627 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.6■□□□□ 0.41
CDX4O14627 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
CDX4O14627 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.6■□□□□ 0.41
CDX4O14627 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.6■□□□□ 0.41
CDX4O14627 AC005829.1-201ENST00000570002 483 ntBASIC17.6■□□□□ 0.41
CDX4O14627 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.6■□□□□ 0.41
CDX4O14627 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 AP000867.4-201ENST00000641616 219 ntBASIC17.6■□□□□ 0.41
CDX4O14627 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.6■□□□□ 0.41
CDX4O14627 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.6■□□□□ 0.41
CDX4O14627 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.6■□□□□ 0.41
CDX4O14627 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDX4O14627 AL024508.2-201ENST00000607749 1894 ntBASIC17.6■□□□□ 0.41
CDX4O14627 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms