Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDC7O00311 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDC7O00311 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC7O00311 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDC7O00311 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.02■□□□□ 0.48
CDC7O00311 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC7O00311 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.02■□□□□ 0.48
CDC7O00311 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.02■□□□□ 0.48
CDC7O00311 AC128688.1-201ENST00000487626 519 ntBASIC18.02■□□□□ 0.48
CDC7O00311 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CDC7O00311 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.02■□□□□ 0.48
CDC7O00311 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC7O00311 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CDC7O00311 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 AC067852.2-201ENST00000590513 2313 ntBASIC18.02■□□□□ 0.48
CDC7O00311 FAM87A-204ENST00000613235 858 ntBASIC18.02■□□□□ 0.48
CDC7O00311 AC112497.1-201ENST00000624824 639 ntBASIC18.02■□□□□ 0.48
CDC7O00311 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDC7O00311 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC7O00311 AL096828.2-201ENST00000567259 1965 ntBASIC18.02■□□□□ 0.47
CDC7O00311 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDC7O00311 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDC7O00311 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDC7O00311 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDC7O00311 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDC7O00311 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.01■□□□□ 0.47
CDC7O00311 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.01■□□□□ 0.47
CDC7O00311 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDC7O00311 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDC7O00311 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.01■□□□□ 0.47
CDC7O00311 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDC7O00311 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDC7O00311 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 AC008764.6-201ENST00000595909 2069 ntBASIC18.01■□□□□ 0.47
CDC7O00311 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.01■□□□□ 0.47
CDC7O00311 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDC7O00311 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDC7O00311 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDC7O00311 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDC7O00311 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDC7O00311 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18■□□□□ 0.47
CDC7O00311 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CDC7O00311 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDC7O00311 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18■□□□□ 0.47
CDC7O00311 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18■□□□□ 0.47
CDC7O00311 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18■□□□□ 0.47
CDC7O00311 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18■□□□□ 0.47
CDC7O00311 AC104390.1-201ENST00000555663 520 ntBASIC18■□□□□ 0.47
CDC7O00311 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18■□□□□ 0.47
CDC7O00311 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CDC7O00311 AC138028.4-201ENST00000564984 1845 ntBASIC18■□□□□ 0.47
CDC7O00311 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18■□□□□ 0.47
CDC7O00311 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDC7O00311 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18■□□□□ 0.47
CDC7O00311 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.99■□□□□ 0.47
CDC7O00311 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDC7O00311 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CDC7O00311 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms