Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC233702.3-201ENST00000578656 1387 ntBASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TPM4P1-201ENST00000436100 807 ntBASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RN7SL606P-201ENST00000472779 293 ntBASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC111152.3-201ENST00000569699 673 ntBASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AC074051.2-201ENST00000565115 352 ntBASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 AL024508.2-201ENST00000607749 1894 ntBASIC18.33■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.33■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
C1QTNF3-AMACRE9PGA6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 AC246785.2-201ENST00000432512 513 ntBASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 AC011840.4-201ENST00000578471 627 ntBASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 AL121894.2-201ENST00000602977 491 ntBASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 AL121772.3-201ENST00000610840 674 ntBASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 AC099343.3-201ENST00000605834 2503 ntBASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.32■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
C1QTNF3-AMACRE9PGA6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms