Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 AC060766.5-201ENST00000590539 871 ntBASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRDV1A0A1B0GX56 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 AC008687.6-201ENST00000596318 630 ntBASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRDV1A0A1B0GX56 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRDV1A0A1B0GX56 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
TRDV1A0A1B0GX56 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.14■□□□□ 0.18
TRDV1A0A1B0GX56 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 AL118508.1-201ENST00000613502 2345 ntBASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRDV1A0A1B0GX56 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRDV1A0A1B0GX56 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms