Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
TRGV4A0A0C4DH28 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV4A0A0C4DH28 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV4A0A0C4DH28 AC126763.1-201ENST00000552015 2118 ntBASIC13.21□□□□□ -0.3
TRGV4A0A0C4DH28 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV4A0A0C4DH28 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV4A0A0C4DH28 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 AC128688.1-201ENST00000487626 519 ntBASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 AC093827.2-201ENST00000512654 315 ntBASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 BX088651.1-201ENST00000540551 451 ntBASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 FITM1-202ENST00000559294 800 ntBASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 AC079598.2-202ENST00000546624 1451 ntBASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV4A0A0C4DH28 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 MIR3180-5-201ENST00000583743 153 ntBASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 AC034236.2-201ENST00000606662 1610 ntBASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV4A0A0C4DH28 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRGV4A0A0C4DH28 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms