Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 AC106730.1-201ENST00000566722 1090 ntBASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 MTDHP3-201ENST00000594186 672 ntBASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 LINC00602-201ENST00000629776 2065 ntBASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 AC112777.1-201ENST00000540175 1423 ntBASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 MYLKP1-201ENST00000509077 1580 ntBASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHAC2Q9Y5I4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 MIR940-201ENST00000401276 94 ntBASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 PKD1P6-201ENST00000343738 4769 ntBASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHAC2Q9Y5I4 AC005332.7-201ENST00000614046 2005 ntBASIC21.77■■□□□ 1.07
PCDHAC2Q9Y5I4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHAC2Q9Y5I4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 RPL13AP23-201ENST00000480739 586 ntBASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 AC116407.3-201ENST00000623905 1129 ntBASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 INTS4P1-201ENST00000438455 1935 ntBASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHAC2Q9Y5I4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 KRT18P13-201ENST00000400056 1290 ntBASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 MTCL1P1-201ENST00000446207 792 ntBASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 AC073648.2-201ENST00000510116 352 ntBASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 AL138831.2-201ENST00000606564 490 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms