Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 IFNL4P1-201ENST00000607083 540 ntBASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 AL592071.1-201ENST00000611956 408 ntBASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 AC120498.9-201ENST00000339021 3867 ntBASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.4■□□□□ 0.54
NCKAP1Q9Y2A7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NCKAP1Q9Y2A7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCKAP1Q9Y2A7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 KRT17P6-201ENST00000453795 1220 ntBASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 UNC93B7-201ENST00000509439 705 ntBASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 AC011840.4-201ENST00000578471 627 ntBASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 LINC00167-201ENST00000530583 1419 ntBASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 AL020996.1-203ENST00000536896 2307 ntBASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NCKAP1Q9Y2A7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 KRT18P31-201ENST00000506277 1292 ntBASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AC099336.1-202ENST00000602961 463 ntBASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AC138894.3-201ENST00000603787 634 ntBASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AL732292.2-201ENST00000609649 430 ntBASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AC112777.1-201ENST00000540175 1423 ntBASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 AC009102.3-201ENST00000623118 1491 ntBASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.37■□□□□ 0.53
NCKAP1Q9Y2A7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms