Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 AP002414.3-201ENST00000589352 1468 ntBASIC19.42■□□□□ 0.7
CHD7Q9P2D1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 ABCD1P5-201ENST00000445663 754 ntBASIC19.42■□□□□ 0.7
CHD7Q9P2D1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD7Q9P2D1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 RNA5SP416-201ENST00000516838 111 ntBASIC19.41■□□□□ 0.7
CHD7Q9P2D1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 AC011467.2-201ENST00000598425 242 ntBASIC19.41■□□□□ 0.7
CHD7Q9P2D1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 MIR4469-201ENST00000583919 79 ntBASIC19.41■□□□□ 0.7
CHD7Q9P2D1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 AC107918.4-202ENST00000641623 219 ntBASIC19.41■□□□□ 0.7
CHD7Q9P2D1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 KRT18P41-201ENST00000518924 1277 ntBASIC19.41■□□□□ 0.7
CHD7Q9P2D1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD7Q9P2D1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 AL163051.1-201ENST00000569214 1512 ntBASIC19.4■□□□□ 0.7
CHD7Q9P2D1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.4■□□□□ 0.7
CHD7Q9P2D1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD7Q9P2D1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.39■□□□□ 0.7
CHD7Q9P2D1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHD7Q9P2D1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.39■□□□□ 0.7
CHD7Q9P2D1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.39■□□□□ 0.7
CHD7Q9P2D1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CHD7Q9P2D1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHD7Q9P2D1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.39■□□□□ 0.7
CHD7Q9P2D1 AL139288.1-201ENST00000623748 933 ntBASIC19.39■□□□□ 0.7
CHD7Q9P2D1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD7Q9P2D1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms