Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 AC090616.6-201ENST00000582640 721 ntBASIC16.85■□□□□ 0.29
LRFN1Q9P244 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 AL390719.2-201ENST00000606993 987 ntBASIC16.85■□□□□ 0.29
LRFN1Q9P244 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.85■□□□□ 0.29
LRFN1Q9P244 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRFN1Q9P244 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRFN1Q9P244 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 IGHV3-41-201ENST00000613121 348 ntBASIC16.84■□□□□ 0.29
LRFN1Q9P244 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRFN1Q9P244 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRFN1Q9P244 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRFN1Q9P244 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 MIR149-201ENST00000384879 89 ntBASIC16.83■□□□□ 0.28
LRFN1Q9P244 IGHGP-201ENST00000390555 1178 ntBASIC16.83■□□□□ 0.28
LRFN1Q9P244 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRFN1Q9P244 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.83■□□□□ 0.28
LRFN1Q9P244 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms