Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 HLA-F-220ENST00000434407 884 ntBASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 AL049597.2-201ENST00000565575 961 ntBASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ECHDC1Q9NTX5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 HBZP1-201ENST00000354915 429 ntBASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 LINC01238-205ENST00000567549 1107 ntBASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ECHDC1Q9NTX5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 PHGDH-209ENST00000641074 1780 ntBASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
ECHDC1Q9NTX5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ECHDC1Q9NTX5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.33■■□□□ 1.17
ECHDC1Q9NTX5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms