Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TMPOP1-202ENST00000424642 1267 ntBASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NECTIN3Q9NQS3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 AC141257.4-201ENST00000634557 245 ntBASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 AC136944.6-201ENST00000634818 245 ntBASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.61■□□□□ 0.41
NECTIN3Q9NQS3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 AC008556.1-201ENST00000610908 2040 ntBASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 AL512604.3-201ENST00000569583 964 ntBASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 AC068587.9-201ENST00000641814 219 ntBASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 AC036111.1-201ENST00000533973 1582 ntBASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NECTIN3Q9NQS3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.59■□□□□ 0.41
NECTIN3Q9NQS3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms