Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 AC011270.2-201ENST00000624293 2550 ntBASIC19.29■□□□□ 0.68
CD248Q9HCU0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.29■□□□□ 0.68
CD248Q9HCU0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 AC090164.3-201ENST00000610780 2143 ntBASIC19.28■□□□□ 0.68
CD248Q9HCU0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 AL671277.2-201ENST00000458060 996 ntBASIC19.28■□□□□ 0.68
CD248Q9HCU0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 BICD1-207ENST00000551848 1962 ntBASIC19.28■□□□□ 0.68
CD248Q9HCU0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.28■□□□□ 0.68
CD248Q9HCU0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD248Q9HCU0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.27■□□□□ 0.68
CD248Q9HCU0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 HYMAI.1-201ENST00000620949 238 ntBASIC19.27■□□□□ 0.68
CD248Q9HCU0 AC116407.4-201ENST00000623319 1061 ntBASIC19.27■□□□□ 0.68
CD248Q9HCU0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CD248Q9HCU0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.27■□□□□ 0.68
CD248Q9HCU0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.27■□□□□ 0.67
CD248Q9HCU0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD248Q9HCU0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CD248Q9HCU0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD248Q9HCU0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD248Q9HCU0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms