Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 MIR564-202ENST00000385049 94 ntBASIC21.35■■□□□ 1.01
EFCC1Q9HA90 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 AP005901.3-202ENST00000581653 237 ntBASIC21.35■■□□□ 1.01
EFCC1Q9HA90 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 POM121L3P-201ENST00000419331 1163 ntBASIC21.34■■□□□ 1.01
EFCC1Q9HA90 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 AC139887.3-201ENST00000568585 713 ntBASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
EFCC1Q9HA90 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 TREX1-205ENST00000625293 1783 ntBASIC21.33■■□□□ 1.01
EFCC1Q9HA90 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 PMS2P2-201ENST00000425039 1128 ntBASIC21.33■■□□□ 1.01
EFCC1Q9HA90 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 AL591684.3-201ENST00000605187 298 ntBASIC21.33■■□□□ 1.01
EFCC1Q9HA90 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 AC055717.3-201ENST00000622967 595 ntBASIC21.33■■□□□ 1.01
EFCC1Q9HA90 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.33■■□□□ 1.01
EFCC1Q9HA90 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
EFCC1Q9HA90 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.33■■□□□ 1
EFCC1Q9HA90 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.33■■□□□ 1
EFCC1Q9HA90 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.32■■□□□ 1
EFCC1Q9HA90 AC098818.2-201ENST00000564925 2320 ntBASIC21.32■■□□□ 1
EFCC1Q9HA90 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
EFCC1Q9HA90 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.32■■□□□ 1
EFCC1Q9HA90 IGHGP-201ENST00000390555 1178 ntBASIC21.32■■□□□ 1
EFCC1Q9HA90 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.32■■□□□ 1
EFCC1Q9HA90 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.32■■□□□ 1
EFCC1Q9HA90 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.32■■□□□ 1
EFCC1Q9HA90 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.32■■□□□ 1
EFCC1Q9HA90 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.32■■□□□ 1
EFCC1Q9HA90 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.32■■□□□ 1
EFCC1Q9HA90 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.32■■□□□ 1
EFCC1Q9HA90 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
EFCC1Q9HA90 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms