Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 MIR3652-201ENST00000579335 131 ntBASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 NPAP1P7-201ENST00000613027 823 ntBASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 AC092119.3-201ENST00000612618 583 ntBASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
POLR1BQ9H9Y6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 PRELID1P1-202ENST00000567272 903 ntBASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 AC009237.14-201ENST00000609975 1594 ntBASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.17■□□□□ 0.5
POLR1BQ9H9Y6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 HBZP1-201ENST00000354915 429 ntBASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 AL645929.1-201ENST00000420084 975 ntBASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 SPDYE13P-201ENST00000445314 798 ntBASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 AC092329.2-201ENST00000598402 547 ntBASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR1BQ9H9Y6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
POLR1BQ9H9Y6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
POLR1BQ9H9Y6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms