Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 AL603841.1-201ENST00000430516 664 ntBASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 MIR3180-1-201ENST00000580374 94 ntBASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 MIR3180-3-201ENST00000584616 94 ntBASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCAF1Q9H7N4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 STARP1-201ENST00000397973 869 ntBASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 SPDYE13P-201ENST00000445314 798 ntBASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
SCAF1Q9H7N4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
SCAF1Q9H7N4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC27.33■■□□□ 1.96
SCAF1Q9H7N4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 RN7SL832P-201ENST00000607781 1756 ntBASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 NUS1P1-201ENST00000446295 882 ntBASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 AL662844.1-201ENST00000546340 181 ntBASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 AF228730.7-201ENST00000641842 219 ntBASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCAF1Q9H7N4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 MRPL3P1-201ENST00000400109 1033 ntBASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 BX276092.5-203ENST00000456199 560 ntBASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 FST-202ENST00000396947 2538 ntTSL 5 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC27.31■■□□□ 1.96
SCAF1Q9H7N4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 PTBP1P-201ENST00000554374 1601 ntBASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 SPDYE15P-201ENST00000424157 909 ntBASIC27.3■■□□□ 1.96
SCAF1Q9H7N4 AC106795.1-205ENST00000512851 1056 ntBASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms